| Gene: Usp19 | ID: uc009rps.1_intron_16_0_chr9_108399499_f.3p | SPECIES: mm9 |
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(2) OTHER.mut |
(1) OVARY |
(1) PIWI.ip |
(9) TESTES |
| GTTGATGCCTGCTCAGGCTTTGTCTCAGGTTCTCTAAAGTGCTTTCTGCCCCAGGGCAAGCATATTCCTCTTTTAGTCCACATATCATGTCCTGCCCCATCTCAGTAGACTCCAGTGCAGGACTAAGCCCTCCGTGGTGCCGTGAAGCAGAGCTGGAGAAAGGTCGCACCACATGCCATATGTGTGTCCTTTCTCCCCAGGTAATTAAGAACCGTTTCCACCGTGTTTTCTTGCCCTCCCACTCACTGGA ..........................................................................................................................................................(((((((((.(((((............))))).)))))))))...................................................... ....................................................................................................................................................149................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesWT2() Testes Data. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR037898(GSM510434) ovary_rep3. (ovary) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .......................................................................................................................................................GCTGGAGAAAGGTCGCACCAC.............................................................................. | 21 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - |
| .........................................................................................................................................................TGGAGAAAGGTCGCAgt................................................................................ | 17 | gt | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................AAGCAGAGCTGGAGAAAGGTCGCACC................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 |
| .........................................................................................................................................................TGGAGAAAGGTCGCACCACAT............................................................................ | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - |
| ..................................................................................................................................................................................TATGTGTGTCCTTTCTCCCCt................................................... | 21 | t | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................TGTGTGTCCTTTCTCCCCAGtat............................................... | 23 | tat | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - |
| ........................................................................................................................................................CTGGAGAAAGGTCGCACCACct............................................................................ | 22 | ct | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - |
| GTTGATGCCTGCTCAGGCTTTGTCTCAGGTTCTCTAAAGTGCTTTCTGCCCCAGGGCAAGCATATTCCTCTTTTAGTCCACATATCATGTCCTGCCCCATCTCAGTAGACTCCAGTGCAGGACTAAGCCCTCCGTGGTGCCGTGAAGCAGAGCTGGAGAAAGGTCGCACCACATGCCATATGTGTGTCCTTTCTCCCCAGGTAATTAAGAACCGTTTCCACCGTGTTTTCTTGCCCTCCCACTCACTGGA ..........................................................................................................................................................(((((((((.(((((............))))).)))))))))...................................................... ....................................................................................................................................................149................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesWT2() Testes Data. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR037898(GSM510434) ovary_rep3. (ovary) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................................CCTCTTTTAGTCCACATATCATGTCC.............................................................................................................................................................. | 26 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - |
| .......................................................................GTCCACATATCATgggt.................................................................................................................................................................. | 17 | gggt | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - |
| ..................................................................................................................................................................CGCACCACATGCCAga........................................................................ | 16 | ga | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - |
| .....................................................................TAGTCCACATATCATtata.................................................................................................................................................................. | 19 | tata | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - |
| ...................................................................................................................................................................................................................................TTCTTGCCCTCCCAC........ | 15 | 16 | 0.12 | 0.12 | - | - | 0.12 | - | - | - | - | - | - | - |