| Gene: Traip | ID: uc009rnn.1_intron_5_0_chr9_107863404_f | SPECIES: mm9 |
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(1) OTHER.mut |
(1) OVARY |
(1) PIWI.mut |
(6) TESTES |
| GCTCGGGAGGAGGCCCACCGACTCAAGTGCAAGATGAAAACCATGGAGCAGTGAGTCCCCAGCTGGCTTCTATACTGTCCTTTCATACCTAGGGCACCAGGGGGCGGATTCTCAGGGCTGCAGCTGAAAATGGGTCTTGTTCATCTTTGATTCAGATTCCCAGGTGCCTTTGGCCACAGATTTCCTTTTTTAACCTCTGTGGGCCCCTTCCCTTTTTGTGAGTCCTCTCATTACACTTCTTGTTCTGTTGCCTATGGATAGGTGGCTTGCCATGCCTTTCCCTCCAGGAGCCTCTCTGTGTGAAGTCCCTGACCTTGAAGTCCTCTGTCAGCACCTCTTTTTCCTCAGAAGCATCCCTGGAGCTGAGCTCATCTCTGCTGTAGAACCTTTCCTTGGGCACACCCACCTGCTAAAGCATCCTAGCAGCCCAGGCTGTTGCCATAGCAACAGCAGCAAAGGGAGGCAGACTAACCATCAGCCTCCAGATTTCAAATGCCGTGGGCCGGGAATGTTTTTCAGAATTGAGCTCCTACTCCAGAGCCAGCGGTCTGAGGTGGAGGAGATGATTC |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR037898(GSM510434) ovary_rep3. (ovary) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|
| .....................................................................................................................................GTCTTGTTCATCTTTGATTCAGATTCCCAGGTGCCTTTGGCCACAGATTTCC................................................................................................................................................................................................................................................................................................................................................................................................ | 52 | 1 | 27.00 | 27.00 | 27.00 | - | - | - | - | - | - |
| ................................................................................................................CAGGGCTGCAGCTGAtagc...................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 19 | tagc | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - |
| GCTCGGGAGGAGGCCCACCGACTCAAGTGCAAGATGAAAACCATGGAGCAGTGAGTCCCCAGCTGGCTTCTATACTGTCCTTTCATACCTAGGGCACCAGGGGGCGGATTCTCAGGGCTGCAGCTGAAAATGGGTCTTGTTCATCTTTGATTCAGATTCCCAGGTGCCTTTGGCCACAGATTTCCTTTTTTAACCTCTGTGGGCCCCTTCCCTTTTTGTGAGTCCTCTCATTACACTTCTTGTTCTGTTGCCTATGGATAGGTGGCTTGCCATGCCTTTCCCTCCAGGAGCCTCTCTGTGTGAAGTCCCTGACCTTGAAGTCCTCTGTCAGCACCTCTTTTTCCTCAGAAGCATCCCTGGAGCTGAGCTCATCTCTGCTGTAGAACCTTTCCTTGGGCACACCCACCTGCTAAAGCATCCTAGCAGCCCAGGCTGTTGCCATAGCAACAGCAGCAAAGGGAGGCAGACTAACCATCAGCCTCCAGATTTCAAATGCCGTGGGCCGGGAATGTTTTTCAGAATTGAGCTCCTACTCCAGAGCCAGCGGTCTGAGGTGGAGGAGATGATTC |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR037898(GSM510434) ovary_rep3. (ovary) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|
| .................................AAACCATGGAGCgaac........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ | 16 | gaac | 4.00 | 0.00 | - | 3.00 | 1.00 | - | - | - | - |
| .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGATTTCAAATtacc........................................................................... | 17 | tacc | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - |
| ..........................................................CCAGCTGGCTTCTATACTGTCCTTTCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - |
| .......................................................................................................................................................................................................................................TACACTTCTTGTTCTGTTGCCTATGGA....................................................................................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGGGCCGGGAAaaca............................................................ | 18 | aaca | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - |
| ............GCCCACCGACTCAAGTGCAAGATGAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 26 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | 0.50 |
| .........GAGGCCCACCGACTCAAGTGCAAGATGAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 29 | 2 | 0.50 | 0.50 | - | - | 0.50 | - | - | - | - |