| Gene: Rbm5 | ID: uc009rmy.1_intron_18_0_chr9_107659324_r.5p | SPECIES: mm9 |
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(1) OTHER.mut |
(2) PIWI.ip |
(1) PIWI.mut |
(10) TESTES |
| CTTTGAAGGCCCTCAGCCTGCAGATGTGAGGCTGATGAAGAGGAAAACAGGTGAGAGCTTGCTTGGTTCCTGCCTGTTATAGTTCTCTTCCCCGTTCCCACCTCAGTCCCTAAAAAACATCCTGATAAACCCCAGCCTTCAAACACATGAATTCAGAATGAAAGGTTTGCCATGGCTAAGGAATATGAATGACTTTGAAAACGATGCTAGCATCTGAGGAACTTTTTAAAAACTTTGCTTTTAGGGATTT |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..............................................................................................................................................ACACATGAATTCAGAATGAAAGGTTTGCCATGGCTAAGGAATATGAATGACT........................................................ | 52 | 1 | 160.00 | 160.00 | 160.00 | - | - | - | - | - | - | - | - | - |
| ........................TGTGAGGCTGATGAAGAGGAAAACAGGT...................................................................................................................................................................................................... | 28 | 1 | 2.00 | 2.00 | - | - | 1.00 | - | 1.00 | - | - | - | - | - |
| ...................GCAGATGTGAGGCTGATGAAGAGGAA............................................................................................................................................................................................................. | 26 | 1 | 2.00 | 2.00 | - | - | - | 1.00 | - | - | 1.00 | - | - | - |
| ........................TGTGAGGCTGATGAAGAGGAAAACAGG....................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - |
| ............................AGGCTGATGAAGAGGAAAACAGGTGt.................................................................................................................................................................................................... | 26 | t | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - |
| .................CTGCAGATGTGAGGCTGATGAAGAGGA.............................................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - |
| ...................GCAGATGTGAGGCTGATGAAGAGGA.............................................................................................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - |
| ................................................................................................................................................ACATGAATTCAGAATGAAAG...................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - |
| ...................GCAGATGTGAGGCTGATGAAGAGGAAA............................................................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - |
| ....................CAGATGTGAGGCTGATGAAGAGGA.............................................................................................................................................................................................................. | 24 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - |
| ........................TGTGAGGCTGATGAAGAGGAAAACA......................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - |
| ...................................................................................................................................................................................GGAATATGAATGACTTTGAAAACGATGCTAGC....................................... | 32 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - |
| .....................AGATGTGAGGCTGATGAAGAGG............................................................................................................................................................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - |
| .....................AGATGTGAGGCTGATGAAGAGGAAA............................................................................................................................................................................................................ | 25 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - |
| ............................................................................................................................................................................................................TGCTAGCATCTGAGGAACTTTTTAAA.................... | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - |
| CTTTGAAGGCCCTCAGCCTGCAGATGTGAGGCTGATGAAGAGGAAAACAGGTGAGAGCTTGCTTGGTTCCTGCCTGTTATAGTTCTCTTCCCCGTTCCCACCTCAGTCCCTAAAAAACATCCTGATAAACCCCAGCCTTCAAACACATGAATTCAGAATGAAAGGTTTGCCATGGCTAAGGAATATGAATGACTTTGAAAACGATGCTAGCATCTGAGGAACTTTTTAAAAACTTTGCTTTTAGGGATTT |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ............................................................................................TCCCACCTCAGTCCCTAggg.......................................................................................................................................... | 20 | ggg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 |
| ...................................................................................................ACCTCAGTCCCTAAA........................................................................................................................................ | 15 | 12 | 0.08 | 0.08 | - | - | - | - | - | 0.08 | - | - | - | - |