| Gene: Sema3f | ID: uc009rms.1_intron_14_0_chr9_107594619_r | SPECIES: mm9 |
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(5) OTHER.mut |
(1) PIWI.ip |
(2) PIWI.mut |
(17) TESTES |
| CCTCCCCGCAGCGCATTGAGGAGTGCATACTGTCAGGCAAGGATGGCAATGTGAGTGCAGTGGGGTCCACCGAGGGTGAGGCCGTGATCTCAGAGATGGACAGACATGGGCAGTTGTCTGGGCATCCACACAGCTTTCTGTCTGGCCACAGGGAGAGTGTGGTAACTTCGTCCGGCTCATCCAGCCTTGGAACCGAACACA ................................................................................................(((.((((((.(((.((((((.(((....))).))))))))))))))).)))..................................................... ..........................................................................................91..........................................................151................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesWT3() Testes Data. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | mjTestesWT2() Testes Data. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) |
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| ...............................................................................................ATGGACAGACATGGGCAGTTG..................................................................................... | 21 | 1 | 15.00 | 15.00 | 11.00 | 1.00 | 2.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ...............................................................................................ATGGACAGACATGGGCAGTTGTCT.................................................................................. | 24 | 1 | 13.00 | 13.00 | - | - | - | 1.00 | 1.00 | 2.00 | - | 2.00 | 1.00 | 1.00 | 1.00 | - | 1.00 | 1.00 | 1.00 | - | 1.00 |
| .............................................................................................AGATGGACAGACATGGGCAGTTGT.................................................................................... | 24 | 1 | 9.00 | 9.00 | 5.00 | 2.00 | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................ATGGACAGACATGGGCAGTTGT.................................................................................... | 22 | 1 | 8.00 | 8.00 | - | 1.00 | - | 3.00 | 1.00 | - | 1.00 | - | 1.00 | - | - | - | 1.00 | - | - | - | - |
| ...............................................................................................ATGGACAGACATGGGCAGTTGTC................................................................................... | 23 | 1 | 4.00 | 4.00 | - | - | - | 1.00 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ...............................................................................................ATGGACAGACATGGGCAGTTGa.................................................................................... | 22 | a | 4.00 | 15.00 | - | - | 3.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................ATGGACAGACATGGGCAGTTGTCa.................................................................................. | 24 | a | 3.00 | 4.00 | - | 2.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................ATGGACAGACATGGGCAGTTGTaa.................................................................................. | 24 | aa | 1.00 | 8.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ...............................................................................................ATGGACAGACATGGGCAGT....................................................................................... | 19 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................ACAGCTTTCTGTCTGGCCACAGa................................................. | 23 | a | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ..............................................................................................GATGGACAGACATGGGCAGTTGa.................................................................................... | 23 | a | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| CCTCCCCGCAGCGCATTGAGGAGTGCATACTGTCAGGCAAGGATGGCAATGTGAGTGCAGTGGGGTCCACCGAGGGTGAGGCCGTGATCTCAGAGATGGACAGACATGGGCAGTTGTCTGGGCATCCACACAGCTTTCTGTCTGGCCACAGGGAGAGTGTGGTAACTTCGTCCGGCTCATCCAGCCTTGGAACCGAACACA ................................................................................................(((.((((((.(((.((((((.(((....))).))))))))))))))).)))..................................................... ..........................................................................................91..........................................................151................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesWT3() Testes Data. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | mjTestesWT2() Testes Data. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) |
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