| Gene: Ifrd2 | ID: uc009rmd.1_intron_0_0_chr9_107490278_f.3p | SPECIES: mm9 |
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(1) OTHER.ip |
(2) OTHER.mut |
(1) OVARY |
(4) PIWI.ip |
(1) PIWI.mut |
(18) TESTES |
| GTCCCTGAGTAGGCCTAGCTCCTGTGTTCTCTAGCAGATAGGCTTTCTTCCCTTTTTTTCTGCTTCCTAATTCAAGTCCCAGGTTTCAGGCCTTGGTTTGCTCATCTCTGAGATGGGATAGCATTGATGAAGTTAACTGAGGTGCCCTGAGTCACCCTTCACAGGTAGAAGCTGGTCAGATTGGGATTTTATGTCCCCAGGTGCCAGGAGCAGTACCCAGGCTGACTCTGGCTCCAGTGAGGATGAAGCG .......................................................................................................(((.((((..(((..((((.(((.(((((...(((.(((...))).)))....))))))))......)))).)))..)))))))............................................................... .......................................................................................................104................................................................................187............................................................. |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR051939(GSM545783) Mov10L1-associated piRNAs. (mov10L testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR028731(GSM400968) Mili-wt-associated. (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR037897(GSM510433) ovary_rep2. (ovary) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .............................................................................................................................................................TTCACAGGTAGAAGCTGGTCAGATTG................................................................... | 26 | 1 | 21.00 | 21.00 | 8.00 | 5.00 | 2.00 | 1.00 | 4.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................TCACAGGTAGAAGCTGGTCAGATTGGG................................................................. | 27 | 1 | 10.00 | 10.00 | 1.00 | 3.00 | 2.00 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | 1.00 | - |
| .............................................................................................................................................................TTCACAGGTAGAAGCTGGTCAGATTGG.................................................................. | 27 | 1 | 7.00 | 7.00 | 2.00 | 3.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................TGAGTCACCCTTCACAGGTAGAAGCTGG........................................................................... | 28 | 1 | 6.00 | 6.00 | - | 6.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............TAGCTCCTGTGTTCTCTAGCAGATAGGCT.............................................................................................................................................................................................................. | 29 | 1 | 4.00 | 4.00 | 2.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................TAGAAGCTGGTCAGATTGGGATTTT............................................................ | 25 | 1 | 3.00 | 3.00 | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................TCACAGGTAGAAGCTGGTCAGATTGG.................................................................. | 26 | 1 | 3.00 | 3.00 | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................TGAGATGGGATAGCATTGATGAAGTTA................................................................................................................... | 27 | 1 | 3.00 | 3.00 | - | 1.00 | - | - | - | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...................TCCTGTGTTCTCTAGCAGATAGGCTTTC........................................................................................................................................................................................................... | 28 | 1 | 2.00 | 2.00 | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................TGTGTTCTCTAGCAGATAGGCTTTCTT......................................................................................................................................................................................................... | 27 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................TGGGATAGCATTGATGAAGTTAACTG............................................................................................................... | 26 | 1 | 2.00 | 2.00 | - | - | - | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................TTCACAGGTAGAAGCTGGTCAGATTGGGA................................................................ | 29 | 1 | 2.00 | 2.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ............................................................................................................TGAGATGGGATAGCATTGATGAAGTT.................................................................................................................... | 26 | 1 | 2.00 | 2.00 | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............TAGCTCCTGTGTTCTCTAGCAGATAGGC............................................................................................................................................................................................................... | 28 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................TCACAGGTAGAAGCTGGTCAGATTG................................................................... | 25 | 1 | 2.00 | 2.00 | - | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................TCACAGGTAGAAGCTGGTCAGATTGt.................................................................. | 26 | t | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................ACAGGTAGAAGCTGGTCAGATTGGGA................................................................ | 26 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................TGACTCTGGCTCCAGTGAGGATGAAGCG | 28 | 1 | 2.00 | 2.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................TGATGAAGTTAACTGAGGTGCCCTG..................................................................................................... | 25 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ............................................................................................................TGAGATGGGATAGCATTGATGAAGTTAAC................................................................................................................. | 29 | 1 | 2.00 | 2.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................TCACAGGTAGAAGCTGGTCAGATTGGt................................................................. | 27 | t | 2.00 | 3.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................TGTGTTCTCTAGCAGATAGGCTTTCTTC........................................................................................................................................................................................................ | 28 | 1 | 2.00 | 2.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............TAGCTCCTGTGTTCTCTAGCAGATAGG................................................................................................................................................................................................................ | 27 | 1 | 2.00 | 2.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ......................TGTGTTCTCTAGCAGATAGGCTTTCTTCC....................................................................................................................................................................................................... | 29 | 1 | 2.00 | 2.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................TGAGTCACCCTTCACAGGTAGAAGCTG............................................................................ | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............TAGCTCCTGTGTTCTCTAGCAGATAG................................................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................TGGCTCCAGTGAGGATGAAGCG | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...................TCCTGTGTTCTCTAGCAGATAGGCTT............................................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................TGATGAAGTTAACTGAGGTGCCCTGcg................................................................................................... | 27 | cg | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...........................................................CTGCTTCCTAATTCAAGTCCCAGGTgt.................................................................................................................................................................... | 27 | gt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ....................CCTGTGTTCTCTAGCAGATAGGCTTTCTT......................................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................TAGCATTGATGAAGTTAACTGAGGTGC......................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................TCCTGTGTTCTCTAGCAGATAGGCTTT............................................................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................CAGGCTGACTCTGGCTCCAGTGAGG........ | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................TAGAAGCTGGTCAGATTGGGATTTTA........................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................CACAGGTAGAAGCTGGTCAGATTGGGt................................................................ | 27 | t | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....TGAGTAGGCCTAGCTCCTGTGTTCTCTAGC....................................................................................................................................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................TTCACAGGTAGAAGCTGGTCAGATTGGG................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................TCACAGGTAGAAGCTGGTCAGATTGGGt................................................................ | 28 | t | 1.00 | 10.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| .................................................................................................................TGGGATAGCATTGATGAAGTTAACTGt.............................................................................................................. | 27 | t | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .................................................................................................................TGGGATAGCATTGATGAAGTTAACTGA.............................................................................................................. | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................CTTCACAGGTAGAAGCTGGTCAGATTG................................................................... | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................TTTTCTGCTTCCTAATTCAAGTCCCAGG....................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..........................................................................................................TCTGAGATGGGATAG................................................................................................................................. | 15 | 6 | 0.17 | 0.17 | - | - | - | - | - | - | - | - | - | - | - | 0.17 | - | - | - | - | - | - | - |
| GTCCCTGAGTAGGCCTAGCTCCTGTGTTCTCTAGCAGATAGGCTTTCTTCCCTTTTTTTCTGCTTCCTAATTCAAGTCCCAGGTTTCAGGCCTTGGTTTGCTCATCTCTGAGATGGGATAGCATTGATGAAGTTAACTGAGGTGCCCTGAGTCACCCTTCACAGGTAGAAGCTGGTCAGATTGGGATTTTATGTCCCCAGGTGCCAGGAGCAGTACCCAGGCTGACTCTGGCTCCAGTGAGGATGAAGCG .......................................................................................................(((.((((..(((..((((.(((.(((((...(((.(((...))).)))....))))))))......)))).)))..)))))))............................................................... .......................................................................................................104................................................................................187............................................................. |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR051939(GSM545783) Mov10L1-associated piRNAs. (mov10L testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR028731(GSM400968) Mili-wt-associated. (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR037897(GSM510433) ovary_rep2. (ovary) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .....................................................................................................................................................................................................................................CCAGTGAGGATGAAGggaa.. | 19 | ggaa | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |