| Gene: Alas1 | ID: uc009rji.1_intron_0_0_chr9_106136529_r.3p | SPECIES: mm9 |
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(3) OTHER.mut |
(4) PIWI.ip |
(1) PIWI.mut |
(18) TESTES |
| CCCTCTCTCACCCTCCTGAATGCTAGCTCTGTTCCATGTGTCAGTGGATGGGCATTTGGGGTACTTCCACTGTCGAAGTCTTAGGAATGGGGGGTGAGCATTCACGTGCAGATTTTTGTGTGGCCATGCACTCTGATTCTCTTGGGCAAAAGATCCTGTGATGTTAAAAAAAAAAACAAAAACCCTGTCTCTCCCCACAGAGAAGCTGCTGGTCACGTGGAAGCGAGTTGGGCTGGAACTTAAGCCACAT ...................................................................((..(((...((((.((((((.((((....((((...((..(((....)))..))...)))).)))).)))).)).))))....)))..))............................................................................................ .................................................................66...........................................................................................159......................................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR014235(GSM319959) 2 dpp total. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ......................................TGTCAGTGGATGGGCATTTGGGGTACTTCCACTGTCGAAGTCTTAGGAATGG................................................................................................................................................................ | 52 | 1 | 65.00 | 65.00 | 65.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................TGCACTCTGATTCTCTTGGGCAAAAGATC............................................................................................... | 29 | 1 | 57.00 | 57.00 | - | 24.00 | 13.00 | 8.00 | 2.00 | 3.00 | 4.00 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - |
| ..............................................................................................................................TGCACTCTGATTCTCTTGGGCAAAAGA................................................................................................. | 27 | 1 | 9.00 | 9.00 | - | 5.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................TGCACTCTGATTCTCTTGGGCAAAAG.................................................................................................. | 26 | 1 | 8.00 | 8.00 | - | 3.00 | 2.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................TGCACTCTGATTCTCTTGGGCAAAAGAT................................................................................................ | 28 | 1 | 6.00 | 6.00 | - | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................TGCTGGTCACGTGGAAGCGAGTTGG................... | 25 | 1 | 5.00 | 5.00 | - | 1.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................TGGTCACGTGGAAGCGAGTTGGGCTG............... | 26 | 1 | 4.00 | 4.00 | - | 1.00 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .......................TAGCTCTGTTCCATGTGTCAGTGGATGG....................................................................................................................................................................................................... | 28 | 1 | 3.00 | 3.00 | - | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................TAGCTCTGTTCCATGTGTCAGTGGATG........................................................................................................................................................................................................ | 27 | 1 | 3.00 | 3.00 | - | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................TCTGATTCTCTTGGGCAAAAGATCCTG............................................................................................ | 27 | 1 | 2.00 | 2.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................TGTCGAAGTCTTAGGAATGGGGGGTG.......................................................................................................................................................... | 26 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................TGGTCACGTGGAAGCGAGTTGGGCTGc.............. | 27 | c | 1.00 | 4.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................TGGAAGCGAGTTGGGCTGGAACTTAA....... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................TGCTAGCTCTGTTCCATGTGTCAGTGGAT......................................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................CACTGTCGAAGTCTTAGGAATGGGGGG............................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................TGGTCACGTGGAAGCGAGTTGGtctt............... | 26 | tctt | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................GAGAAGCTGCTGGTCACGTGGAAGC.......................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................AAAAAAAAAACAAAAACCCTatt............................................................. | 23 | att | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ..............................................................................................................................................................................................................TGCTGGTCACGTGGAAGCGAGTTG.................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .............................................................................................................................................................................................................................AGCGAGTTGGGCTGGAACTTA........ | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .....................................................................CTGTCGAAGTCTTAGGAATGGGGGG............................................................................................................................................................ | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ..............................................................................................................................................................................................................TGCTGGTCACGTGGAAGCGAGTTGGt.................. | 26 | t | 1.00 | 5.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................AAGCGAGTTGGGCTGGAACTTAAGCCAC.. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .................................................................TCCACTGTCGAAGTCTTAGGAATGGGG.............................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................TAGCTCTGTTCCATGTGTCAGTGGAT......................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................TGCACTCTGATTCTCTTGGGCAAAAGATCC.............................................................................................. | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................GAGAAGCTGCTGGTCACGTGGAAGCGA........................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................ACGTGGAAGCGAGTTGGGCTGGAACTT......... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ......................................................................TGTCGAAGTCTTAGGAATGGGG.............................................................................................................................................................. | 22 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................TGGAAGCGAGTTGGGCTGGAA............ | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ............................................................................................................CAGATTTTTGTGTGGCCATGCACTCT.................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................GCTGGTCACGTGGAAGC.......................... | 17 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................GAAGCGAGTTGGGCTGGAACTTAAGCC.... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................AAGCGAGTTGGGCTGGAACTTAAGCCA... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................TTCCACTGTCGAAGTCTTAGGAATGGG............................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............TCCTGAATGCTAGCTCTGTTCCATGTG.................................................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................TGGGCAAAAGATCCTGTGATGTTAAAAAAAA............................................................................. | 31 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...................................................................CACTGTCGAAGTCTTAGGAATGGGG.............................................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................TGTGGCCATGCACTCTGATTCTCTTGG......................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................GTGGAAGCGAGTTGGGCTGGAAC........... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ................................................................TTCCACTGTCGAAGTCTTAGGAATGG................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................TGTCGAAGTCTTAGGAATGGGGGGTGt......................................................................................................................................................... | 27 | t | 1.00 | 2.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................TGCACTCTGATTCTCTTGGGCAAAAGATCa.............................................................................................. | 30 | a | 1.00 | 57.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................TGGAAGCGAGTTGGGCTGGAACTTA........ | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................CGTGGAAGCGAGTTGGGCTGGAACTT......... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| CCCTCTCTCACCCTCCTGAATGCTAGCTCTGTTCCATGTGTCAGTGGATGGGCATTTGGGGTACTTCCACTGTCGAAGTCTTAGGAATGGGGGGTGAGCATTCACGTGCAGATTTTTGTGTGGCCATGCACTCTGATTCTCTTGGGCAAAAGATCCTGTGATGTTAAAAAAAAAAACAAAAACCCTGTCTCTCCCCACAGAGAAGCTGCTGGTCACGTGGAAGCGAGTTGGGCTGGAACTTAAGCCACAT ...................................................................((..(((...((((.((((((.((((....((((...((..(((....)))..))...)))).)))).)))).)).))))....)))..))............................................................................................ .................................................................66...........................................................................................159......................................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR014235(GSM319959) 2 dpp total. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...........CCTCCTGAATGCTAGCTCTGTTCCA...................................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |