| Gene: Armc8 | ID: uc009ref.1_intron_9_0_chr9_99406152_r.5p | SPECIES: mm9 |
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(2) OTHER.mut |
(1) PIWI.ip |
(1) PIWI.mut |
(13) TESTES |
| TCAAGCTCTATGCCTCTCTTGGAGCAAATGATGAAGACATCCGGAAGAAGGTGAGTCTGGGAGAGGGGCGTCCCCCAGTCCTGACAGCCAGCAGGCAGGGAGTGACGTCAACCTGAAAGTCGTGGTGAAGAGCACTAACAGTGACTGTTTGAATAAAATAAAGCAGAGTGACAAAAGGCATAATTGAAGAATGAATGGGACCTGGATTTGGGGGGCTGTTTGTTTTTAGAACATAGAGTGGCATGGCCAT |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR037902(GSM510438) testes_rep3. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...........................................................GGAGAGGGGCGTCCCCCAGTCCTGACAGCCAGCAGGCAGGGAGTGACGTCAA........................................................................................................................................... | 52 | 1 | 120.00 | 120.00 | 120.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ........TATGCCTCTCTTGGAGCAAA.............................................................................................................................................................................................................................. | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ......................................................................................................................................................................................ATTGAAGAATGAATGGGACCTGGATTT......................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ...................................GACATCCGGAAGAAGatca.................................................................................................................................................................................................... | 19 | atca | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................TTTAGAACATAGAGTGGCATGGCCATgt | 28 | gt | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...................TGGAGCAAATGATGAAGACATCCGGA............................................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| .......................................................................................................................................................................................TTGAAGAATGAATGGGACCTGGA............................................ | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ...............................................................................................................................................................................................................................TTTTAGAACATAGAGgaca........ | 19 | gaca | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ...................................................................................................................AAAGTCGTGGTGAAGAGCACTAACAGTG........................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .....................................................................................................................................................TGAATAAAATAAAGCAGAGTGACAAAAGGC....................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .............................................................................................................................................................ATAAAGCAGAGTGACtata.......................................................................... | 19 | tata | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ............CCTCTCTTGGAGCAAATGATGAAGACATCC................................................................................................................................................................................................................ | 30 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| TCAAGCTCTATGCCTCTCTTGGAGCAAATGATGAAGACATCCGGAAGAAGGTGAGTCTGGGAGAGGGGCGTCCCCCAGTCCTGACAGCCAGCAGGCAGGGAGTGACGTCAACCTGAAAGTCGTGGTGAAGAGCACTAACAGTGACTGTTTGAATAAAATAAAGCAGAGTGACAAAAGGCATAATTGAAGAATGAATGGGACCTGGATTTGGGGGGCTGTTTGTTTTTAGAACATAGAGTGGCATGGCCAT |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR037902(GSM510438) testes_rep3. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................................................................................................CTAACAGTGACTGTaaca...................................................................................................... | 18 | aaca | 2.00 | 0.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - |