| Gene: Phip | ID: uc009qvu.1_intron_0_0_chr9_82765469_r.3p | SPECIES: mm9 |
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(2) OTHER.mut |
(1) PIWI.ip |
(8) TESTES |
| CGTGAACACCTAACAAATAAGTCAATCAGCAAATAATTTTGAAAATAAAAAATGTTTAGGTAATCGCAGAAATTTGTCAAATTTCTTTCTATTACTCTGTCATTACATAGAAGTATGCTAGTCCCGTTACCAACTAGTTGGAGGACTAGACAATAACAAAAAGCCCGTTATATATTAAGTGTACTGTTTTTCTTTTCCAGGAGAGTGTAAGAACAATGTTCTTATACCAGGAACCATTCAAGTAAATGGC ......................................................................................................................((((((.....((((....)))).))))))..........((((((....(((((.....)))))..))))))(((((....)))))............................................. ......................................................................................................................119....................................................................................206.......................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesWT3() Testes Data. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...........................................................................................................................CCGTTACCAACTAGTTGGAGGACTAGACAATAACAAAAAGCCCGTTATATAT........................................................................... | 52 | 1 | 20.00 | 20.00 | 20.00 | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TATATTAAGTGTACTGTTTTTCTTTTCCAGaaa............................................... | 33 | aaa | 2.00 | 0.00 | - | 2.00 | - | - | - | - | - | - |
| ............................................................................................................................................GAGGACTAGACAATAAC............................................................................................. | 17 | 1 | 2.00 | 2.00 | - | - | 2.00 | - | - | - | - | - |
| .............................................................................................................................................................AAAAAGCCCGTagtt.............................................................................. | 15 | agtt | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - |
| ..............................................................................................................................................................................................................................TATACCAGGAACCAcaaa.......... | 18 | caaa | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - |
| .........................................................................................................................................................................................................AGAGTGTAAGAACAAaga............................... | 18 | aga | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 |
| ..................................................................................................................................................................................GTGTACTGTTTTTCTTTTCCAGaa................................................ | 24 | aa | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - |
| CGTGAACACCTAACAAATAAGTCAATCAGCAAATAATTTTGAAAATAAAAAATGTTTAGGTAATCGCAGAAATTTGTCAAATTTCTTTCTATTACTCTGTCATTACATAGAAGTATGCTAGTCCCGTTACCAACTAGTTGGAGGACTAGACAATAACAAAAAGCCCGTTATATATTAAGTGTACTGTTTTTCTTTTCCAGGAGAGTGTAAGAACAATGTTCTTATACCAGGAACCATTCAAGTAAATGGC ......................................................................................................................((((((.....((((....)))).))))))..........((((((....(((((.....)))))..))))))(((((....)))))............................................. ......................................................................................................................119....................................................................................206.......................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesWT3() Testes Data. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR037902(GSM510438) testes_rep3. (testes) |
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| .......................................................................................................................................................................................TTTTCTTTTCCAGGAGcttt............................................... | 20 | cttt | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - |