| Gene: Slc17a5 | ID: uc009qup.1_intron_0_0_chr9_78417752_r.3p | SPECIES: mm9 |
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(1) OTHER.mut |
(3) PIWI.ip |
(1) PIWI.mut |
(13) TESTES |
| AAGTGGGAAGCAGTCATGCGGTATTTAAAGTTCTATGTAAGAACAAACACATCTGTCTCAGTATGCAGATCGGGTTCTGGCTCTCATAAGTAGGCAAATCCTTGTATATATGAATAACAAAGAACTTAAAATAAGTTTCTTCCATTTGTTGCTAGTAAATATTTGATTGTCCTTATGATTTTATGTACCTATATACACAGAGTTGTGTAAAAATTTCTCGATAGAAAAGGCTTAAGAAAAACTTCAAATC .................................................................((((......))))....(((((((..(((.((((...((((.(((...((((((((((((((...)))))))......)))))))...))).))))..))))))))))))))........................................................................ ..........................................................59...........................................................................................................................184................................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ........................................................................................................................................................TAGTAAATATTTGATTGTCCTTATGATT...................................................................... | 28 | 1 | 8.00 | 8.00 | 4.00 | - | - | - | 2.00 | 2.00 | - | - | - | - | - | - | - |
| ...............................................................TGCAGATCGGGTTCTGGCTCTCATA.................................................................................................................................................................. | 25 | 1 | 5.00 | 5.00 | 4.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................TGCTAGTAAATATTTGATTGTCCTT............................................................................ | 25 | 1 | 2.00 | 2.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................TAGAAAAGGCTTAAGAAAAACTTCAAAT. | 28 | 1 | 2.00 | 2.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................TGTAAAAATTTCTCGATAGAAAAGGCT.................. | 27 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................TCTCGATAGAAAAGGCTTAAGAAAAACTT...... | 29 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................TCGATAGAAAAGGCTTAAGAAAAACTT...... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ................TGCGGTATTTAAAGTTCTATGTAAGAAC.............................................................................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .....................................................TGTCTCAGTATGCAGATCGGGTTCTG........................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ......................................................................................................................................................................................................................TTCTCGATAGAAAAGGCTTAAGAAAAACa....... | 29 | a | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................TCTCGATAGAAAAGGCTTAAGAAAAAC........ | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................TAGAAAAGGCTTAAGAAAAACTTCAAATC | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .....................................................................................................................................................................................................................TTTCTCGATAGAAAAGGCTTAAGAAAAA......... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................TGTGTAAAAATTTCTCGATAGAAAAGGC................... | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................TTCTCGATAGAAAAGGCTTAAGAAAAAC........ | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................TTTGTTGCTAGTAAATATTTGATTGTCC.............................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................TCTCGATAGAAAAGGCTTAAGAAAAACT....... | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................TGTAAAAATTTCTCGATAGAAAAGGC................... | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................AATTTCTCGATAGAAAAGGCTTAAGAA............ | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................TTTGATTGTCCTTATGATTTTATGTAC.............................................................. | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................TGTCTCAGTATGCAGATCGGGgtct............................................................................................................................................................................ | 25 | gtct | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ....................................................................ATCGGGTTCTGGCTCTCATAAGTAGGC........................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .....................................................................TCGGGTTCTGGCTCTCATAAGTAGGCAA......................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................TTTGTTGCTAGTAAATATTTGATTGTCCT............................................................................. | 29 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................AAATTTCTCGATAGAAAAGGCTTAAGA............. | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................TTTTATGTACCTATATACACAGAGTTGT............................................ | 28 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................TTGCTAGTAAATATTTGATTGTCCTTA........................................................................... | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................TTTGTTGCTAGTAAATATTTGATTGTCCTT............................................................................ | 30 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................TTCTCGATAGAAAAGGCTTAAGAA............ | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ........................................................................................................TATATATGAATAACAAAGAACTTAAAATA..................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .................................................................................................................................................TTGTTGCTAGTAAATATTTGATTGTCCT............................................................................. | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................TTGTATATATGAATAACAAAGAAC............................................................................................................................. | 24 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| AAGTGGGAAGCAGTCATGCGGTATTTAAAGTTCTATGTAAGAACAAACACATCTGTCTCAGTATGCAGATCGGGTTCTGGCTCTCATAAGTAGGCAAATCCTTGTATATATGAATAACAAAGAACTTAAAATAAGTTTCTTCCATTTGTTGCTAGTAAATATTTGATTGTCCTTATGATTTTATGTACCTATATACACAGAGTTGTGTAAAAATTTCTCGATAGAAAAGGCTTAAGAAAAACTTCAAATC .................................................................((((......))))....(((((((..(((.((((...((((.(((...((((((((((((((...)))))))......)))))))...))).))))..))))))))))))))........................................................................ ..........................................................59...........................................................................................................................184................................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) |
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| ................................................................................................................................AAGTTTCTTCCATTTctga....................................................................................................... | 19 | ctga | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |