| Gene: Itga11 | ID: uc009qal.1_intron_10_0_chr9_62599457_f.3p | SPECIES: mm9 |
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(5) OTHER.mut |
(1) OVARY |
(2) PIWI.ip |
(1) PIWI.mut |
(16) TESTES |
| TGGTCAAGTACAGGGCTTTGCATAAGTCAACCACACACCCTCCACTGAGCTGCCTCTCCGGGCTCTTTTGATTAATCCATGTGCATGGGGGAAACAGAACTCATTGCTCCTCCTCTGGCTTGGTTGAGCTCCTTGCCAAACTTAGGCATGGTCTACTGAACACCCAGCACCAGAGACCAGCCTGTCTCCTCCTTCTGCAGGGTACACGGTGACGTCGGTTGTGTCCTCCAGGCAGGGGCGGGTGTATGTG |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | mjTestesWT2() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT1() Testes Data. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR014234(GSM319958) Ovary total. (ovary) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .........................................................................................................................................................TACTGAACACCCAGCACCAGAGACCAGC..................................................................... | 28 | 1 | 35.00 | 35.00 | 12.00 | 6.00 | 5.00 | 4.00 | - | 3.00 | 1.00 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | 1.00 | - |
| .........................................................................................................................................................TACTGAACACCCAGCACCAGAG........................................................................... | 22 | 1 | 6.00 | 6.00 | - | - | - | - | 6.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................TACTGAACACCCAGCACCAGAGACCA....................................................................... | 26 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................TAGGCATGGTCTACTGAACACCCAGCA................................................................................. | 27 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................TAGGCATGGTCTACTGAACACCCAGC.................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .................................................................................................................................................................................................................TGACGTCGGTTGTGTCCTCCcggc................. | 24 | cggc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ..........................................................................................................................................................ACTGAACACCCAGCACCAGAGACCAGC..................................................................... | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................TGATTAATCCATGTGCATGGGGGAAACA.......................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................TTCTGCAGGGTACACGGTGACGTC.................................. | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .........................................................................................................................................................TACTGAACACCCAGCACCAGAGACCAG...................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................AAACAGAACTCATTGCTCCTCCTC....................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................AGGCATGGTCTACTGAACACCCAGCA................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................TACTGAACACCCAGCACCAGAGACa........................................................................ | 25 | a | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................TAGGCATGGTCTACTGAACACCCAGCACC............................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................CACACCCTCCACTGAGCTGCCTCTCC............................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ...................................................................................................................................................................................................TGCAGGGTACACGGTGACGTCGG................................ | 23 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................TACTGAACACCCAGCACCAGAGACCAGCCT................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ............................................................................................................................................................TGAACACCCAGCACCAGAGACCAGCCT................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................TGCATGGGGGAAACAGAAC...................................................................................................................................................... | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................ACACGGTGACGTCGGTTGTGT.......................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................TAGGCATGGTCTACTGAACACCCAGCAC................................................................................ | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................TTGCTCCTCCTCTGGCTTGGTTGAGC......................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ....................................................................................................................................................TGGTCTACTGAACACCCAGCACCAGA............................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| TGGTCAAGTACAGGGCTTTGCATAAGTCAACCACACACCCTCCACTGAGCTGCCTCTCCGGGCTCTTTTGATTAATCCATGTGCATGGGGGAAACAGAACTCATTGCTCCTCCTCTGGCTTGGTTGAGCTCCTTGCCAAACTTAGGCATGGTCTACTGAACACCCAGCACCAGAGACCAGCCTGTCTCCTCCTTCTGCAGGGTACACGGTGACGTCGGTTGTGTCCTCCAGGCAGGGGCGGGTGTATGTG |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | mjTestesWT2() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT1() Testes Data. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR014234(GSM319958) Ovary total. (ovary) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .....................................................................................................................................TGCCAAACTTAGGCATGGTCTACTGAACAC....................................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |