(1)
OTHER.ip
(2)
OTHER.mut
(1)
OVARY
(4)
PIWI.ip
(2)
PIWI.mut
(22)
TESTES

Sense strand
TGTGACAGGATCAAAGACGAATTCCAGTTCCTGCAAGCTCAGTATCACAGGTAAGGCGGGTGGGGGGTGGCCCCGGGCTGGCGAGGAGGGCGGCCTTGCGCGCTCCTGCTACCCCCCCCCCGCGGGGCCGAGGGGGACGTCGACCCCCGGCTGCGGGGCGGCTGGGCCTCCGCCTTTTGTTTCCCCTCACCGAGCGCGCAGCCTTAACCCTTTGCGTTCTGCGATCTCCCAGCTCCTAAAGCCCGCCCTGTCGAGGGTCGGGGTCTTGCGCCTTCGTCCGGGCCCGCCCCCGCGTGGCCGAGACGAGTCCCCTCGCTAGATCAAGGGAAGTTTGGAGTTGGTACTGCTAGGCTCCGGGTGGTGGGCAGCCACCCTCACTGCCCGGAGGATGCTAGAGAATGGGTTACTCAGGGTGCCGGGCAAGTGAAGTGGTCCTCCTAGGCCCTAGGGTCCAGGTCTCGAAGGAGGCGGTGTAAGCGCCAGGCCTGAGAGTCTCTTCCTGCCCTCACAGCCTCAAAGTGGAGTATGACAAGCTGGCTAACGAGAAGACGGAGATGCAGC


Size Perfect hit Total Norm Perfect Norm SRR363963(GSM822765)
AdultGlobal 5'-RACEread_length: 105. (testes)
mjTestesWT4()
Testes Data. (testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
mjTestesWT2()
Testes Data. (testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
mjTestesWT3()
Testes Data. (testes)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR042486(GSM539878)
mouse ovaries [09-002]. (ovary)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR037901(GSM510437)
testes_rep2. (testes)
SRR051939(GSM545783)
Mov10L1-associated piRNAs. (mov10L testes)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
........................................................................................................................................................................................................................TTCTGCGATCTCCCAGCTCCTAAAGCCCGCCCTGTCGAGGGTCGGGGTCTTG..................................................................................................................................................................................................................................................................................................... 52 1 27.00 27.00 27.00 - - - - - - - - - - - - - - - - - - - - - -
................................................................................................................................................................................................................................................................GTCGGGGTCTTGCGC.................................................................................................................................................................................................................................................................................................. 15 1 2.00 2.00 - - - - - - - - - - 2.00 - - - - - - - - - - - -
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAGTATGACAAGCTGGCT...................... 21 1 2.00 2.00 - - 1.00 1.00 - - - - - - - - - - - - - - - - - - -
...........CAAAGACGAATTCCAGTTCCTGCAAGCTC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 29 1 2.00 2.00 - - - - 1.00 - - 1.00 - - - - - - - - - - - - - - -
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAGTGGAGTATGACAAGCTGGCTAAC................... 28 1 2.00 2.00 - - - - - - - 1.00 - - - - - - - 1.00 - - - - - - -
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAGTATGACAAGCTGGCTA..................... 22 1 2.00 2.00 - - - 2.00 - - - - - - - - - - - - - - - - - - -
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAGTGGAGTATGACAAGCTGGCTA..................... 26 1 2.00 2.00 - - - - - - - 1.00 - - - - 1.00 - - - - - - - - - -
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAAGTGGAGTATGACAAGCTGGC....................... 25 1 2.00 2.00 - - 1.00 - 1.00 - - - - - - - - - - - - - - - - - -
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTGGAGTATGACAAGCTGGCTAACGA................. 28 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - -
......AGGATCAAAGACGAATTCCAGTTCCTGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 28 1 1.00 1.00 - - - - - - - - - - - - - - - - - - 1.00 - - - -
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACAGCCTCAAAGTGGAGTATGACA.............................. 26 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - -
.....................TTCCAGTTCCTGCAAGCTCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 21 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - -
......AGGATCAAAGACGAATTCCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 21 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - 1.00 -
..............................................................................TGGCGAGGAGGGCGGttc................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 18 ttc 1.00 0.00 - - - - - 1.00 - - - - - - - - - - - - - - - - -
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTATGACAAGCTGGCTAACGA................. 22 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - -
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGGAGTATGACAAGCTGGCT...................... 22 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - -
.....CAGGATCAAAGACGAATTCCAGTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 24 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - -
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAGTGGAGTATGACAAGCTGGCTAA.................... 27 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - -
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTGGAGTATGACAAGCTGGC....................... 22 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - -
......................TCCAGTTCCTGCAAGCTCAGTATCACAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 28 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - 1.00 - -
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAAGTGGAGTATGACAAGCTGG........................ 24 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - -
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACAAGCTGGCTAACGAGAAGACG.......... 25 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - -
................................................................................................................................................CCCCGGCTGCGGGGCGGCT.............................................................................................................................................................................................................................................................................................................................................................................................................. 19 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - -
.........................................................................................................................................................................................................................................TCCTAAAGCCCGCCgatc...................................................................................................................................................................................................................................................................................................................... 18 gatc 1.00 0.00 - - - - - - - - - - - - - - - - - 1.00 - - - - -
................................................................................GCGAGGAGGGCGGaggt................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 17 aggt 1.00 0.00 - - - 1.00 - - - - - - - - - - - - - - - - - - -
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAAGTGGAGTATGACAAGCTGGCT...................... 26 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - -
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAGTATGACAAGCTGGCTAAC................... 24 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - -
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGTGGAGTATGACAAGCTGGCT...................... 24 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - -
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTGGAGTATGACAAGCTGGCTAACGt................. 28 t 1.00 0.00 - - - - - - - - 1.00 - - - - - - - - - - - - - -
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTGGAGTATGACAAGCTGGCTAACGAGA............... 30 1 1.00 1.00 - - - - - - - - - - - - 1.00 - - - - - - - - - -
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGTGGAGTATGACAAGCTGGCTAACG.................. 28 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - -
..TGACAGGATCAAAGACGAATTC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 22 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - -
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAGAAGACGGAGATGCAGC 21 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - -
......AGGATCAAAGACGAATTCCAGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 22 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - -
.................................................................................................................CCCCCCCCGCGGGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................. 15 3 0.33 0.33 - - - - - - - - - - - - - - - - - - - - - - 0.33
...............................................................................................................CCCCCCCCCCGCGGG................................................................................................................................................................................................................................................................................................................................................................................................................................................... 15 19 0.05 0.05 - - - - - - - - - - - - - - - - 0.05 - - - - - -

Antisense strand
TGTGACAGGATCAAAGACGAATTCCAGTTCCTGCAAGCTCAGTATCACAGGTAAGGCGGGTGGGGGGTGGCCCCGGGCTGGCGAGGAGGGCGGCCTTGCGCGCTCCTGCTACCCCCCCCCCGCGGGGCCGAGGGGGACGTCGACCCCCGGCTGCGGGGCGGCTGGGCCTCCGCCTTTTGTTTCCCCTCACCGAGCGCGCAGCCTTAACCCTTTGCGTTCTGCGATCTCCCAGCTCCTAAAGCCCGCCCTGTCGAGGGTCGGGGTCTTGCGCCTTCGTCCGGGCCCGCCCCCGCGTGGCCGAGACGAGTCCCCTCGCTAGATCAAGGGAAGTTTGGAGTTGGTACTGCTAGGCTCCGGGTGGTGGGCAGCCACCCTCACTGCCCGGAGGATGCTAGAGAATGGGTTACTCAGGGTGCCGGGCAAGTGAAGTGGTCCTCCTAGGCCCTAGGGTCCAGGTCTCGAAGGAGGCGGTGTAAGCGCCAGGCCTGAGAGTCTCTTCCTGCCCTCACAGCCTCAAAGTGGAGTATGACAAGCTGGCTAACGAGAAGACGGAGATGCAGC


Size Perfect hit Total Norm Perfect Norm SRR363963(GSM822765)
AdultGlobal 5'-RACEread_length: 105. (testes)
mjTestesWT4()
Testes Data. (testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
mjTestesWT2()
Testes Data. (testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
mjTestesWT3()
Testes Data. (testes)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR042486(GSM539878)
mouse ovaries [09-002]. (ovary)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR037901(GSM510437)
testes_rep2. (testes)
SRR051939(GSM545783)
Mov10L1-associated piRNAs. (mov10L testes)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
.....................................................................................................................................................................................................................GCGTTCTGCGATCTCCCAGCTCCTA................................................................................................................................................................................................................................................................................................................................... 25 1 13.00 13.00 - 4.00 5.00 - - 3.00 - - - - - - - 1.00 - - - - - - - - -
.......................CCAGTTCCTGCAAGCTCAGTATCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 24 1 8.00 8.00 - 7.00 1.00 - - - - - - - - - - - - - - - - - - - -
......................TCCAGTTCCTGCAAGCTCAGTATCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 25 1 7.00 7.00 - - - - - - 2.00 - 2.00 3.00 - - - - - - - - - - - - -
.....................TTCCAGTTCCTGCAAGCTCAGTATCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 26 1 7.00 7.00 - - 2.00 - 1.00 - 2.00 - 1.00 - - - - - - 1.00 - - - - - - -
...................................................................................................................................................................................................................TTGCGTTCTGCGATCTCCCAGCTCCTA................................................................................................................................................................................................................................................................................................................................... 27 1 4.00 4.00 - 4.00 - - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCTCACAGCCTCAAAGTGGAGTA................................... 25 1 3.00 3.00 - - - - - 3.00 - - - - - - - - - - - - - - - - -
.......................CCAGTTCCTGCAAGCTCAGTATCACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 26 1 2.00 2.00 - 2.00 - - - - - - - - - - - - - - - - - - - - -
....................................................................................................................................................................................................................TGCGTTCTGCGATCTCCCAGCTCCTA................................................................................................................................................................................................................................................................................................................................... 26 1 2.00 2.00 - - 1.00 - - 1.00 - - - - - - - - - - - - - - - - -
...................AATTCCAGTTCCTGCAAGCTCAGTATCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 28 1 2.00 2.00 - - - - 1.00 - 1.00 - - - - - - - - - - - - - - - -
..................GAATTCCAGTTCCTGCAAGCTCAGTA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 26 1 2.00 2.00 - - - - 2.00 - - - - - - - - - - - - - - - - - -
....................ATTCCAGTTCCTGCAAGCTCAGTATCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 27 1 2.00 2.00 - - - - - - 1.00 - 1.00 - - - - - - - - - - - - - -
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTCTCTTCCTGCCCTCACAG.................................................. 21 1 1.00 1.00 - - - - - - - - - - - - - - 1.00 - - - - - - - -
.................................................................................................................................................................................................................CTTTGCGTTCTGCGATCTCCCAGCTCCTA................................................................................................................................................................................................................................................................................................................................... 29 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - - - - -
......AGGATCAAAGACGAATTCCAGTTCCTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 27 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - -
.............AAGACGAATTCCAGTTCCTGCAAGCTCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 28 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - -
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGCCCTCACAGCCTCtg.............................................. 19 tg 1.00 0.00 - - - - - - - - - - - - - - 1.00 - - - - - - - -
........GATCAAAGACGAATTCCAGTTCCTGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 27 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - -
........................................................................................................................................................................................ACCGAGCGCGCAGCCcgaa...................................................................................................................................................................................................................................................................................................................................................................... 19 cgaa 1.00 0.00 - - - - - - - - - - - - - - - - - - - 1.00 - - -
................................................................................................................CCCCCGCGGGGCCGAtcgg.............................................................................................................................................................................................................................................................................................................................................................................................................................................. 19 tcgg 1.00 0.00 - - - - - - - - - - - - - - - - 1.00 - - - - - -
......................................................................................................................................................................CCTCCGCCTTTTGTTTCCCCTCACCGA................................................................................................................................................................................................................................................................................................................................................................................ 27 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - -
..........................................................................................................................................................................................ACCGAGCGCGCAGCCTcg..................................................................................................................................................................................................................................................................................................................................................................... 18 cg 1.00 0.00 - - - - - - - - - - - - - 1.00 - - - - - - - - -
.....................................................................................................................................................................................................................TCTGCGATCTCCCAGCTCCTAccgc................................................................................................................................................................................................................................................................................................................................... 25 ccgc 1.00 0.00 - - - - - - - - - 1.00 - - - - - - - - - - - - -
................................................................................................................CCCCCCCCCGCGGGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................. 15 10 0.10 0.10 - - 0.10 - - - - - - - - - - - - - - - - - - - -