| Gene: Neo1 | ID: uc009pxk.1_intron_7_0_chr9_58747041_r.3p | SPECIES: mm9 |
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(2) OTHER.mut |
(1) OVARY |
(3) PIWI.ip |
(1) PIWI.mut |
(12) TESTES |
| TCTTCTAGGTACCTCCTTACACTGCAAGCTGTGTCTGTGTACCTTGGCACACAATCTGTAGTTTCCCATTATTTGTGTTGTTTCATTTTCTTACGGAGTAGACTGAAGTGTTTTGTTTTTAGAAGACACTTAACTAGCTGTGGAATGGACTGTCACATCTACATGTTGGGTTTTTACTGACGTGATTTCTTCTGCTTCAGCCTTAGGGTCAGCAGGAAAAGGAAGCCGACTACCAGACCTGGGATCTGAC |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR042486(GSM539878) mouse ovaries [09-002]. (ovary) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR037900(GSM510436) testes_rep1. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .....................................................................................................................................................CTGTCACATCTACATGTTGGGTTTTTACTGACGTGATTTCTTCTGCTTCAGC................................................. | 52 | 1 | 392.00 | 392.00 | 392.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................GTGGAATGGACTGTCACA............................................................................................. | 18 | 1 | 5.00 | 5.00 | - | 5.00 | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................CCGACTACCAGACCTGGa....... | 18 | a | 2.00 | 0.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................AGGAAGCCGACTACCAGACCTGGGATCT... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .........................................................................................................................................................................................................................AAAGGAAGCCGACTACCAGACCTGGG....... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ....................................................................................................................................ACTAGCTGTGGAATGGACTG.................................................................................................. | 20 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................GAAAAGGAAGCCGACTACCAGACCTGG........ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................CAGCAGGAAAAGGAAGCCGACTACCAG.............. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ...........................................................................................................................................................................................................................AGGAAGCCGACTACCAGACCTGGGATC.... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ..............................................................................................................................CACTTAACTAGCTGTGGAAT........................................................................................................ | 20 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .......................................................................TTTGTGTTGTTTCAgact................................................................................................................................................................. | 18 | gact | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..............................................................................................................................................................................TACTGACGTGATTTCTTCTGCTT..................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ........................................................................................................................................................................................................................AAAAGGAAGCCGACTACCAGACCT.......... | 24 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................GGAAAAGGAAGCCGACTACCAGACCTGG........ | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| TCTTCTAGGTACCTCCTTACACTGCAAGCTGTGTCTGTGTACCTTGGCACACAATCTGTAGTTTCCCATTATTTGTGTTGTTTCATTTTCTTACGGAGTAGACTGAAGTGTTTTGTTTTTAGAAGACACTTAACTAGCTGTGGAATGGACTGTCACATCTACATGTTGGGTTTTTACTGACGTGATTTCTTCTGCTTCAGCCTTAGGGTCAGCAGGAAAAGGAAGCCGACTACCAGACCTGGGATCTGAC |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR042486(GSM539878) mouse ovaries [09-002]. (ovary) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR037900(GSM510436) testes_rep1. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .............................................................................................................................................ATGGACTGTCACATatg............................................................................................ | 17 | atg | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |