| Gene: Pml | ID: uc009pwp.1_intron_0_0_chr9_58068377_r.3p | SPECIES: mm9 |
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(3) OTHER.mut |
(2) PIWI.ip |
(2) PIWI.mut |
(16) TESTES |
| GGAAGAGCCAGCTTCAGGACGGGTGAGCCATCCCCGCCCCCTATCGGAGCCAGGTAAGAACTACATATGGAAGATACTTGGTTCCTGCCAGCAGGCTTCAAAGTGGGATTTCTAGACAGTGGGTCAACAGCCCGATCCCTTGCACTCAACCCAGTGCCTCCTGAACCCTGAACCTCACCGTGACCTTCTTTCCTGCCTAGCCCAGAAAATTAGCCAGCTGGCCGCGGTGAACCGGGAAAGCAAGTTCCGT .........................................................((.((((...((((((.(((((((..((((....))))..)))).)))...))))))....)))).))............................................................................................................................. ..................................................51..............................................................................131..................................................................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | GSM475281(GSM475281) total RNA. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) |
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| ......................................................TAAGAACTACATATGGAAGATACTTGG......................................................................................................................................................................... | 27 | 1 | 11.00 | 11.00 | 5.00 | 2.00 | 2.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - |
| .......................................................................................................TGGGATTTCTAGACAGTGGGTCAACAGC....................................................................................................................... | 28 | 1 | 3.00 | 3.00 | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................TTCAAAGTGGGATTTCTAGACAGTGG................................................................................................................................ | 26 | 1 | 2.00 | 2.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ........................................................................................................................................................................TGAACCTCACCGTGACCTTCTTTCCTG....................................................... | 27 | 1 | 2.00 | 2.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ..................................................................................................................................................................................................................TAGCCAGCTGGCCGCGG....................... | 17 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................TTCTAGACAGTGGGTCAA........................................................................................................................... | 18 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................CACCGTGACCTTCTTTCCTGCCTAGCCC............................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ............................................................................................................TTTCTAGACAGTGGGcat............................................................................................................................ | 18 | cat | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .....................................................GTAAGAACTACATATGGAAGATACTTGG......................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................TGGAAGATACTTGGTTCCTGCCAGCAG............................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................TACATATGGAAGATACTTGGTTCCTGC.................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ........................................................................................................................................................................TGAACCTCACCGTGACCTTCTTTCCTGCC..................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................CGGTGAACCGGGAAAGCAAGTT.... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ...........................................TCGGAGCCAGGTAAGAACTACATATGGAAGt................................................................................................................................................................................ | 31 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .......................................................................................................TGGGATTTCTAGACAGTGGGTCAACAG........................................................................................................................ | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................AGAAAATTAGCCAGttga............................. | 18 | ttga | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ................................................................................................TTCAAAGTGGGATTTCTAGACAGT.................................................................................................................................. | 24 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..AAGAGCCAGCTTCAGGACGGGTGAGCtt............................................................................................................................................................................................................................ | 28 | tt | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .........................................TATCGGAGCCAGGTAAGAACT............................................................................................................................................................................................ | 21 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| GGAAGAGCCAGCTTCAGGACGGGTGAGCCATCCCCGCCCCCTATCGGAGCCAGGTAAGAACTACATATGGAAGATACTTGGTTCCTGCCAGCAGGCTTCAAAGTGGGATTTCTAGACAGTGGGTCAACAGCCCGATCCCTTGCACTCAACCCAGTGCCTCCTGAACCCTGAACCTCACCGTGACCTTCTTTCCTGCCTAGCCCAGAAAATTAGCCAGCTGGCCGCGGTGAACCGGGAAAGCAAGTTCCGT .........................................................((.((((...((((((.(((((((..((((....))))..)))).)))...))))))....)))).))............................................................................................................................. ..................................................51..............................................................................131..................................................................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | GSM475281(GSM475281) total RNA. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) |
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