(7)
OTHER.mut
(5)
PIWI.ip
(2)
PIWI.mut
(29)
TESTES

Sense strand
CCTCTGACTCTCAAGTGCTGGGATTAAAGGCGTGCACCACCACGCCCAGCTATGGGTAGCATTCCCCTACACCATCTCAAAACAAACACATAGTAGTTTTTCATACTTGGCCATTAAGATTTTATGCTTGGTTAAAACTTAACAGTGTTGGTTCATTGTTTCTTTTGGTGGATACTTAGAAGCCCTTCTCTTTATCACAGGTGGTACAGGATCTATGTAAAGTAGCTGGCGTAGCAAAGGTTCTGGTGGC
...................................................................................................................................((((((...(((((((......)))))))..))))))..((((...((((....))))...))))......................................................
......................................................................................................................119..............................................................................200................................................
Size Perfect hit Total Norm Perfect Norm SRR363964(GSM822766)
AdultGlobal 5'-RACEread_length: 105. (testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
mjTestesWT1()
Testes Data. (testes)
SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)
GSM475280(GSM475280)
Mili-IP. (mili testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
GSM475281(GSM475281)
total RNA. (testes)
GSM475279(GSM475279)
Miwi-IP. (miwi testes)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
SRR051940(GSM545784)
18-32 nt total small RNAs (Mov10l+/-). (testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR028731(GSM400968)
Mili-wt-associated. (testes)
SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR014235(GSM319959)
2 dpp total. (testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)
...........................................................................................................................ATGCTTGGTTAAAACTTAACAGTGTTGGTTCATTGTTTCTTTTGGTGGATAC........................................................................... 52 1 95.00 95.00 95.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.............................................................................................................................................................................................................ACAGGATCTATGTAAAGTAGCTGGCGTA................. 28 1 6.00 6.00 - 3.00 - - 2.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - -
................GCTGGGATTAAAGGCGTGCACCACCACGttag.......................................................................................................................................................................................................... 32 ttag 4.00 0.00 - - - - - - 4.00 - - - - - - - - - - - - - - - - - - - - - -
..................TGGGATTAAAGGCGTGCACCAaaaa............................................................................................................................................................................................................... 25 aaaa 4.00 0.00 - - 2.00 - - 2.00 - - - - - - - - - - - - - - - - - - - - - - -
.........................................................................................................................................................................................................................TAAAGTAGCTGGCGTAGCAAAGGTTCT...... 27 1 3.00 3.00 - 1.00 - 1.00 - - - - - - - - - - - - - - - - - - 1.00 - - - - - -
..................TGGGATTAAAGGCGTGCACCACCtaa.............................................................................................................................................................................................................. 26 taa 3.00 0.00 - 1.00 - - - - - 1.00 - - - 1.00 - - - - - - - - - - - - - - - - -
.......................................................................................................................................................................................................................TGTAAAGTAGCTGGCGTAGCAAAGGTTC....... 28 1 3.00 3.00 - 3.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
.............................................................................................................................................................................................................ACAGGATCTATGTAAAGTAGCTGGCGT.................. 27 1 2.00 2.00 - 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
....TGACTCTCAAGTGCTtaga................................................................................................................................................................................................................................... 19 taga 2.00 0.00 - - - - - - - - - 2.00 - - - - - - - - - - - - - - - - - - -
..................TGGGATTAAAGGCGTGCACCACCACGCgcgg......................................................................................................................................................................................................... 31 gcgg 2.00 0.00 - - 1.00 - - - - - - - - - - - - 1.00 - - - - - - - - - - - - -
.......................................................................................................................................................................................................................TGTAAAGTAGCTGGCGTAGCAAAGG.......... 25 1 2.00 2.00 - - - - - - - - - - 2.00 - - - - - - - - - - - - - - - - - -
..................TGGGATTAAAGGCGTGCACCACCACGaaga.......................................................................................................................................................................................................... 30 aaga 2.00 0.00 - - - - - - - - - - - - - 2.00 - - - - - - - - - - - - - - -
............................................................................................................................................................................................................TACAGGATCTATGTAAAGTAGCTGGCGTA................. 29 1 2.00 2.00 - - - 2.00 - - - - - - - - - - - - - - - - - - - - - - - - -
................................................................................................................................................................................................................................GCTGGCGTAGCAAAGGTTCTGGTGGC 26 1 2.00 2.00 - 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
..................TGGGATTAAAGGCGTGCACCACCACGacga.......................................................................................................................................................................................................... 30 acga 2.00 0.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - 1.00 - - - - -
..................TGGGATTAAAGGCGTGCACCAaat................................................................................................................................................................................................................ 24 aat 2.00 0.00 - - - - - 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - -
..................................................................................................................................................................................................................ATCTATGTAAAGTAGCTGGCGTAGCAAA............ 28 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................................................AAGTAGCTGGCGTAGCAAAGGTTC....... 24 1 1.00 1.00 - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - -
....................................................................................................................................................................TTGGTGGATACTTAGAAGCC.................................................................. 20 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - -
..................................................................................................................................................................................................................ATCTATGTAAAGTAGCTGGCGTAGCAAAG........... 29 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
..................TGGGATTAAAGGCGTGCACCACCACGacgt.......................................................................................................................................................................................................... 30 acgt 1.00 0.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
............................................................................................................................................................................................................................AGTAGCTGGCGTAGCAAAGGTTCTGGT... 27 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
............................................................................................................................................................................................................TACAGGATCTATGTAAAGTAGCTGGCGT.................. 28 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
..................TGGGATTAAAGGCGTGCACCACCcaga............................................................................................................................................................................................................. 27 caga 1.00 0.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - -
..............................................................................................................................................................................................................................TAGCTGGCGTAGCAAAGGTTCTGGTGGC 28 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 -
...........................................................................................................................................................................................................................AAGTAGCTGGCGTAGCAAAGGTTCTa..... 26 a 1.00 1.00 - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - -
..................TGGGATTAAAGGCGTGCACCACCccaa............................................................................................................................................................................................................. 27 ccaa 1.00 0.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
................................................................................................................................................................................................................................GCTGGCGTAGCAAAGGTTCTGGTGGt 26 t 1.00 0.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
...................................................................................................................................................................................................................TCTATGTAAAGTAGCTGGCGTAGCAAA............ 27 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
..................TGGGATTAAAGGCGTGCACCACCttta............................................................................................................................................................................................................. 27 ttta 1.00 0.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - -
.......................................................................................................................................................................................................................TGTAAAGTAGCTGGCGTAGCAAAGGT......... 26 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
................................................................................................................................................................................................................................GCTGGCGTAGCAAAGGTTCTGGTGGCtt 28 tt 1.00 2.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
................GCTGGGATTAAAGGCGTGCACCACCtat.............................................................................................................................................................................................................. 28 tat 1.00 0.00 - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - -
.................................................................................................................................................................................................................GATCTATGTAAAGTAGCTGGCGTAGC............... 26 1 1.00 1.00 - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - -
..................TGGGATTAAAGGCGTGCACCACCACGCCCAactt...................................................................................................................................................................................................... 34 actt 1.00 0.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
..................TGGGATTAAAGGCGTGCACCACCctga............................................................................................................................................................................................................. 27 ctga 1.00 0.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
........................TAAAGGCGTGCACCACCACGCCCtta........................................................................................................................................................................................................ 26 tta 1.00 0.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................................................AAGTAGCTGGCGTAGCAAAGGTTCTG..... 26 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
..................TGGGATTAAAGGCGTGCACCACCACGCaaa.......................................................................................................................................................................................................... 30 aaa 1.00 0.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
................GCTGGGATTAAAGGCGTGCACCACCACGCaa........................................................................................................................................................................................................... 31 aa 1.00 0.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................................................................................TATGTAAAGTAGCTGGCGTAG................ 21 1 1.00 1.00 - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - -
.........................................................................................................................................................................................................................TAAAGTAGCTGGCGTAGCAAAGGTTC....... 26 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - -
..........................................................................................................................................................................................................................AAAGTAGCTGGCGTAGCAAAGGTTCT...... 26 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
..................TGGGATTAAAGGCGTGCACCACCtatt............................................................................................................................................................................................................. 27 tatt 1.00 0.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
..................TGGGATTAAAGGCGTGCACCACCACGCataa......................................................................................................................................................................................................... 31 ataa 1.00 0.00 - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - -
.................................................................................................................................................................................AGAAGCCCTTCTCTTgct....................................................... 18 gct 1.00 0.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
..................TGGGATTAAAGGCGTGCACCACCcgag............................................................................................................................................................................................................. 27 cgag 1.00 0.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
.......................................................................................................................................................................................................................TGTAAAGTAGCTGGCGTAGCAAAGGTT........ 27 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
................................................................................................................................................................................................................GGATCTATGTAAAGTAGCTGGCGTAGCAA............. 29 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
..................TGGGATTAAAGGCGTGCACCACCACGCCCttc........................................................................................................................................................................................................ 32 ttc 1.00 0.00 - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - -
..................TGGGATTAAAGGCGTGCAgct................................................................................................................................................................................................................... 21 gct 1.00 0.00 - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - -
...........................................................................................................................................................................................................................AAGTAGCTGGCGTAGCAAAGGTTCT...... 25 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
..................TGGGATTAAAGGCGTGCACCACCACGata........................................................................................................................................................................................................... 29 ata 1.00 0.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
......................................................................................................................................................................................................AGGTGGTACAGGATCTATGTAA.............................. 22 2 0.50 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - - - - 0.50
..........................................................................................................................................................................................................GGTACAGGATCTATGTAAAGTAGCTGGC.................... 28 2 0.50 0.50 - 0.50 - - - - - - - - - - - - - - - - - - - - - - - - - - -

Antisense strand
CCTCTGACTCTCAAGTGCTGGGATTAAAGGCGTGCACCACCACGCCCAGCTATGGGTAGCATTCCCCTACACCATCTCAAAACAAACACATAGTAGTTTTTCATACTTGGCCATTAAGATTTTATGCTTGGTTAAAACTTAACAGTGTTGGTTCATTGTTTCTTTTGGTGGATACTTAGAAGCCCTTCTCTTTATCACAGGTGGTACAGGATCTATGTAAAGTAGCTGGCGTAGCAAAGGTTCTGGTGGC
...................................................................................................................................((((((...(((((((......)))))))..))))))..((((...((((....))))...))))......................................................
......................................................................................................................119..............................................................................200................................................
Size Perfect hit Total Norm Perfect Norm SRR363964(GSM822766)
AdultGlobal 5'-RACEread_length: 105. (testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
mjTestesWT1()
Testes Data. (testes)
SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)
GSM475280(GSM475280)
Mili-IP. (mili testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
GSM475281(GSM475281)
total RNA. (testes)
GSM475279(GSM475279)
Miwi-IP. (miwi testes)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
SRR051940(GSM545784)
18-32 nt total small RNAs (Mov10l+/-). (testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR028731(GSM400968)
Mili-wt-associated. (testes)
SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR014235(GSM319959)
2 dpp total. (testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)
....TCTCAAGTGCTGGGATTAAAGGCGTcgca......................................................................................................................................................................................................................... 29 cgca 1.00 0.00 - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - -
..ACTCTCAAGTGCTGGGATTAAAagaa.............................................................................................................................................................................................................................. 26 agaa 1.00 0.00 - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - -
..TCTGACTCTCAAGTGCTGGGATTAAA.............................................................................................................................................................................................................................. 26 17 0.06 0.06 - - - - - - - - 0.06 - - - - - - - - - - - - - - - - - - - -
...CTGACTCTCAAGTGCTGGGATTAAA.............................................................................................................................................................................................................................. 25 17 0.06 0.06 - - - - - - - - - - - 0.06 - - - - - - - - - - - - - - - - -