| Gene: Mcam | ID: uc009pbw.1_intron_1_0_chr9_43944732_f | SPECIES: mm9 |
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(4) PIWI.ip |
(2) PIWI.mut |
(14) TESTES |
| GTGGCCCCTCACGGGCCTCAGGCAACTTCAGCCAAGTGGACTGGTTTTTGGTGAGCGCCTGGACTTTGGAGGGCAGTAGTTGTGTGGGAAGCAACTGTCTCTCTGGCAGGTAGCTCATCTCTCAGCTCCTTTCCCTCAGATTCACAAGGAGAGGCAGATACTGATTTTCCGTGTGCACCAAGGCAAGGG |
Size | Perfect hit | Total Norm | Perfect Norm | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesWT1() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR037902(GSM510438) testes_rep3. (testes) |
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| ..................................................GTGAGCGCCTGGACTTTGGAGGGCA.................................................................................................................. | 25 | 1 | 5.00 | 5.00 | - | - | 2.00 | - | - | 2.00 | - | - | 1.00 | - | - | - | - | - |
| ..................................................GTGAGCGCCTGGACTTTGGAGGGCAG................................................................................................................. | 26 | 1 | 5.00 | 5.00 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | 1.00 | 1.00 | - | - | - |
| ............................................................................................................................................TTCACAAGGAGAGGCAGATACTGATT....................... | 26 | 1 | 5.00 | 5.00 | - | 2.00 | - | 2.00 | - | - | - | 1.00 | - | - | - | - | - | - |
| ..................................................GTGAGCGCCTGGACTTTGGAGGGCAGT................................................................................................................ | 27 | 1 | 5.00 | 5.00 | - | 2.00 | - | 2.00 | - | - | 1.00 | - | - | - | - | - | - | - |
| ............................................................................................................................................TTCACAAGGAGAGGCAGATACTGATTT...................... | 27 | 1 | 4.00 | 4.00 | - | 2.00 | - | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - |
| .....................................................................................................TCTGGCAGGTAGCTCATCTCTCAGC............................................................... | 25 | 1 | 4.00 | 4.00 | - | - | - | - | 4.00 | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................TCACAAGGAGAGGCAGATACTGATTT...................... | 26 | 1 | 3.00 | 3.00 | - | 1.00 | - | - | - | - | - | 1.00 | 1.00 | - | - | - | - | - |
| .....................................................AGCGCCTGGACTTTGGAGGGCAGTAGTTGTGTG....................................................................................................... | 33 | 1 | 2.00 | 2.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................AGATACTGATTTTCCGTGTGC............. | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ..........................TTCAGCCAAGTGGACTGGTTT.............................................................................................................................................. | 21 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................GATTCACAAGGAGAGGCAt................................ | 19 | t | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..................................................GTGAGCGCCTGGACTTTGGA....................................................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ............................................................................................................................................TTCACAAGGAGAGGCAGATACTGAT........................ | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..................................................GTGAGCGCCTGGACTTTGGAGGGCAGc................................................................................................................ | 27 | c | 1.00 | 5.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .......................AACTTCAGCCAAGTGGACTGG................................................................................................................................................. | 21 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................TTCACAAGGAGAGGCAGATACTGtaa....................... | 26 | taa | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................TTTGGAGGGCAGTAatat........................................................................................................... | 18 | atat | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ..............................................................................................................................................CACAAGGAGAGGCAGATACTGATT....................... | 24 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................AACTTCAGCCAAGTGGACTGGTTTT............................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................AAGGAGAGGCAGATACTGA......................... | 19 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................GATTCACAAGGAGAGGCAGATACTGt......................... | 26 | t | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................GATTCACAAGGAGAGGCAGATACTGA......................... | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................GATTCACAAGGAGAGGCAGATACT........................... | 24 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................AAGTGGACTGGTTTTTG........................................................................................................................................... | 17 | 2 | 0.50 | 0.50 | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - |
| GTGGCCCCTCACGGGCCTCAGGCAACTTCAGCCAAGTGGACTGGTTTTTGGTGAGCGCCTGGACTTTGGAGGGCAGTAGTTGTGTGGGAAGCAACTGTCTCTCTGGCAGGTAGCTCATCTCTCAGCTCCTTTCCCTCAGATTCACAAGGAGAGGCAGATACTGATTTTCCGTGTGCACCAAGGCAAGGG |
Size | Perfect hit | Total Norm | Perfect Norm | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesWT1() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR037902(GSM510438) testes_rep3. (testes) |
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