| Gene: Arhgef12 | ID: uc009pba.1_intron_9_0_chr9_42786365_r.5p | SPECIES: mm9 |
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(1) PIWI.ip |
(2) PIWI.mut |
(8) TESTES |
| ACACCTCCAATCTCAAGTTGTCCGAGTACCCAAATGTTGACGAGCTCAGGGTGAGAGATGGTTTAATCATAATTAAAAACGTAAAGGACTGTGCTAAAGGCCTGGCAGGCAGCTAACACCCCAGTGGGAACAGCCATCCTTGAAAGAGGCCTGCCTGGTAGATTGTCTGCATTTGTGACCTCATTCTGCTTGTTGAATGTCTGCTCTGTGTCAAGGGTGCATTCATATTTGTTACAGGAGTTACTTTATG |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesWT3() Testes Data. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................GTGAGAGATGGTTTAATCATAATTAAAAACGTAAAGGACTGTGCTAAAGGCC.................................................................................................................................................... | 52 | 1 | 70.00 | 70.00 | 70.00 | - | - | - | - | - | - | - |
| .................................ATGTTGACGAGCTCAGG........................................................................................................................................................................................................ | 17 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - |
| ..............................CAAATGTTGACGAGCTCA.......................................................................................................................................................................................................... | 18 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - |
| ......................CGAGTACCCAAATGTTGACGAGCTCAtt........................................................................................................................................................................................................ | 28 | tt | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - |
| .....................CCGAGTACCCAAATGTTGACGAGCTCAG......................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - |
| ...................................GTTGACGAGCTCAGGGTGAG................................................................................................................................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - |
| ..............................CAAATGTTGACGAGCTCAGGaatt.................................................................................................................................................................................................... | 24 | aatt | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - |
| ..................................................................................................................................CAGCCATCCTTGAAAGAGtgc................................................................................................... | 21 | tgc | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - |
| ACACCTCCAATCTCAAGTTGTCCGAGTACCCAAATGTTGACGAGCTCAGGGTGAGAGATGGTTTAATCATAATTAAAAACGTAAAGGACTGTGCTAAAGGCCTGGCAGGCAGCTAACACCCCAGTGGGAACAGCCATCCTTGAAAGAGGCCTGCCTGGTAGATTGTCTGCATTTGTGACCTCATTCTGCTTGTTGAATGTCTGCTCTGTGTCAAGGGTGCATTCATATTTGTTACAGGAGTTACTTTATG |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesWT3() Testes Data. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ............................................................AATCATAATTAAAAAgaca........................................................................................................................................................................... | 19 | gaca | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 |