| Gene: 9030425E11Rik | ID: uc009ozt.1_intron_3_0_chr9_40580612_f.3p | SPECIES: mm9 |
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(9) OTHER.mut |
(3) PIWI.ip |
(23) TESTES |
| GATGTTTTGTAGTTCCTGAGGATGCATAACAATTTCAGATAACATATCCCTATTTCCCATGCCCCAAAACAGGATCTTCTCTGTCAGTTCGTCCCATCCAACCATTCGTCATCACAGGTCTGTGATGCTCATCAATAAACAACAGAGATGCTGTTGTGGAGGGGATTTGCCATCTCGATTTCTGATTTCTGCTCCTACAGATTACAACAACCCTGGCCGAGTGCTGCTGCAGAATCTCACCATGGCCTCC |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesWT2() Testes Data. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesWT3() Testes Data. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesWT4() Testes Data. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR363959(GSM822761) AdultSmall RNA Miwi IPread_length: 36. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR029040(GSM433292) 6w_hetero_tdrd6-KO. (tdrd6 testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..............................................................................................................ATCACAGGTCTGTGATGC.......................................................................................................................... | 18 | 1 | 381.00 | 381.00 | 210.00 | 19.00 | 78.00 | 12.00 | 41.00 | 14.00 | 3.00 | 3.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................ATCACAGGTCTGTGATG........................................................................................................................... | 17 | 1 | 284.00 | 284.00 | 108.00 | 89.00 | 20.00 | 40.00 | 6.00 | 18.00 | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................ATCACAGGTCTGTGATGCc......................................................................................................................... | 19 | c | 63.00 | 381.00 | 35.00 | 5.00 | 10.00 | 5.00 | 2.00 | - | 5.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................ACAGGTCTGTGATGC.......................................................................................................................... | 15 | 13 | 52.15 | 52.15 | 0.46 | 2.46 | 12.85 | 1.08 | 26.69 | 3.92 | - | 0.54 | 1.62 | - | - | 0.69 | 0.46 | 0.38 | 1.00 | - | - | - | - | - | - | - | - |
| ..............................................................................................................ATCACAGGTCTGTGATGCcc........................................................................................................................ | 20 | cc | 21.00 | 381.00 | 10.00 | 1.00 | 3.00 | 5.00 | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................ATCACAGGTCTGTGATGCcct....................................................................................................................... | 21 | cct | 17.00 | 381.00 | 1.00 | 8.00 | 2.00 | 4.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................AGGTCTGTGATGCTCttag.................................................................................................................... | 19 | ttag | 11.00 | 0.00 | 6.00 | 3.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................AGGTCTGTGATGCTCtta..................................................................................................................... | 18 | tta | 7.00 | 0.00 | - | 1.00 | - | 6.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................CAGGTCTGTGATGCTCtta..................................................................................................................... | 19 | tta | 6.00 | 0.00 | - | 1.00 | 1.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................ATCACAGGTCTGTGATGCcctt...................................................................................................................... | 22 | cctt | 3.00 | 381.00 | - | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................ACAGGTCTGTGATGCTC........................................................................................................................ | 17 | 2 | 2.50 | 2.50 | - | - | - | 1.50 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................ATCACAGGTCTGTGAT............................................................................................................................ | 16 | 3 | 2.33 | 2.33 | - | - | 0.67 | 1.00 | 0.33 | - | - | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................ATCACAGGTCTGTGA............................................................................................................................. | 15 | 14 | 1.79 | 1.79 | - | 0.36 | - | 0.86 | 0.36 | 0.14 | - | 0.07 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................ACAGGTCTGTGATGCTCtta..................................................................................................................... | 20 | tta | 1.50 | 2.50 | - | 1.00 | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................ATCACAGGTCTGTGATGa.......................................................................................................................... | 18 | a | 1.00 | 284.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................TACAACAACCCTGGCCGAGTGCTGCTG..................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................TACAACAACCCTGGCCGAGTGCTGCTGC.................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ..............................................................................................................ATCACAGGTCTGTGATGCTCt....................................................................................................................... | 21 | t | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................TACAACAACCCTGGCCGAGTGCTG........................ | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ..................................................................................................................CAGGTCTGTGATGCTaca...................................................................................................................... | 18 | aca | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................TACAACAACCCTGGCCGAGTGCTGCTGCAGt................. | 31 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................ACAACAACCCTGGCCGAGTGCTGCTGCA................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................ACAGGTCTGTGATGCTCtt...................................................................................................................... | 19 | tt | 1.00 | 2.50 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................ATCACAGGTCTGTGATGCg......................................................................................................................... | 19 | g | 1.00 | 381.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................TTACAACAACCCTGGCCGAGTGCTGCT...................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................ATCACAGGTCTGTGATGagca....................................................................................................................... | 21 | agca | 1.00 | 284.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................CAGGTCTGTGATGCccc....................................................................................................................... | 17 | ccc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..............................................................................................................ATCACAGGTCTGTGATGatct....................................................................................................................... | 21 | atct | 1.00 | 284.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................TGCCATCTCGATTTCTGATTTCTcct......................................................... | 26 | cct | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ................................................................................................................................................................................................................................TGCTGCAGAATCTCACCATGGCCTCC | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ................................................................................................................................................................................................................................TGCTGCAGAATCTCACCATGGCCTCCta | 28 | ta | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................TACAACAACCCTGGCCGAGTGCTGCTGCA................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ...............................................................................................................TCACAGGTCTGTGATGCc......................................................................................................................... | 18 | c | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................CAGGTCTGTGATGCccta...................................................................................................................... | 18 | ccta | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .................................................................................................................ACAGGTCTGTGATGCTCggc..................................................................................................................... | 20 | ggc | 0.50 | 2.50 | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................ACAGGTCTGTGATGCT......................................................................................................................... | 16 | 4 | 0.50 | 0.50 | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................CACAGGTCTGTGATGC.......................................................................................................................... | 16 | 4 | 0.50 | 0.50 | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................ACAGGTCTGTGATGCgtga...................................................................................................................... | 19 | gtga | 0.08 | 52.15 | - | - | - | - | 0.08 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................ACAGGTCTGTGATGCgc........................................................................................................................ | 17 | gc | 0.08 | 52.15 | - | - | 0.08 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................ACAGGTCTGTGATGCccta...................................................................................................................... | 19 | ccta | 0.08 | 52.15 | - | - | - | - | - | - | - | - | - | - | - | 0.08 | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................ACAGGTCTGTGATGCccc....................................................................................................................... | 18 | ccc | 0.08 | 52.15 | - | - | 0.08 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................ATCACAGGTCTGTGAggg.......................................................................................................................... | 18 | ggg | 0.07 | 1.79 | - | - | 0.07 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| GATGTTTTGTAGTTCCTGAGGATGCATAACAATTTCAGATAACATATCCCTATTTCCCATGCCCCAAAACAGGATCTTCTCTGTCAGTTCGTCCCATCCAACCATTCGTCATCACAGGTCTGTGATGCTCATCAATAAACAACAGAGATGCTGTTGTGGAGGGGATTTGCCATCTCGATTTCTGATTTCTGCTCCTACAGATTACAACAACCCTGGCCGAGTGCTGCTGCAGAATCTCACCATGGCCTCC |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesWT2() Testes Data. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesWT3() Testes Data. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesWT4() Testes Data. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR363959(GSM822761) AdultSmall RNA Miwi IPread_length: 36. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR029040(GSM433292) 6w_hetero_tdrd6-KO. (tdrd6 testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...............................................................................................................................................................................................CTACAGATTACAACagg.......................................... | 17 | agg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ................................................TTTCCCATGCCCCAAaaga....................................................................................................................................................................................... | 19 | aaga | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................TTCTGCTCCTACAGATca................................................ | 18 | ca | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................TTCTGCTCCTACAGATT............................................... | 17 | 3 | 0.67 | 0.67 | - | - | - | - | - | - | - | - | 0.33 | - | - | - | - | - | 0.33 | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................CTGCTCCTACAGATT............................................... | 15 | 12 | 0.08 | 0.08 | - | - | - | - | - | - | - | - | - | - | - | - | 0.08 | - | - | - | - | - | - | - | - | - | - |