chr9:21738167 21738611 +
(4)
OTHER.mut 		(4)
PIWI.ip 		(1)
PIWI.mut 		(20)
TESTES

Sense strand
ATCTCCTGAATATCCAGAAGATGCAGAAAACTCAGGTGAAGTGCCGCAAGGTGAGTGGAAAAAGTGAGTACGTGAGCAACGCCGGGCCAACAGGTTCTTCCTCTGGCTCCCACCACTGGACATGATCTAGGAGGCAGAATTCAAAGCCCAGTGCTGCCACTTAATGCTATGTGATTATGGCCAAATCACTTTGCCTCTCCGGGCTCGATTTGCTTCTCCATATAATGGGTATACTAGCGGTGCTCCCTCCCTGATCAGAAAGTTGTGCTCACTGAGGATTCCGTACTCTCAATACAGCCTGGAACTGGAGTGCTACGTCATGATTACCTTTTCCTATGCTCATCATTACTTGCGTGTCTGATCGCTTGCTCCCCCCACCCCCTCCCGAACCTTAGGTTCTTACCAAGATGAAGCAGCAGGCATACGATTCATGGCCAGAAGCCGA


 Size Perfect hit Total Norm Perfect Norm SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes) 		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes) 		mjTestesWT2()
Testes Data. (testes) 		mjTestesKO7()
Testes Data. (Zcchc11 testes) 		mjTestesKO6()
Testes Data. (Zcchc11 testes) 		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes) 		mjTestesWT1()
Testes Data. (testes) 		mjTestesWT4()
Testes Data. (testes) 		SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes) 		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes) 		SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes) 		SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes) 		SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes) 		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes) 		mjTestesWT3()
Testes Data. (testes) 		SRR014233(GSM319957)
16.5 dpc MIWI2. (miwi2 testes) 		GSM475281(GSM475281)
total RNA. (testes) 		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes) 		mjTestesKO5()
Testes Data. (Zcchc11 testes) 		mjTestesKO8()
Testes Data. (Zcchc11 testes)
.......................................................................................................................ACATGATCTAGGAGGCA..................................................................................................................................................................................................................................................................................................................... 17 1 23.00 23.00 6.00 2.00 7.00 2.00 - 2.00 - 3.00 - - - - - - 1.00 - - - - -
.......................................................................................................................ACATGATCTAGGAGGCAa.................................................................................................................................................................................................................................................................................................................... 18 a 14.00 23.00 1.00 3.00 2.00 2.00 5.00 - - - - 1.00 - - - - - - - - - -
.......................................................................................................................ACATGATCTAGGAGGC...................................................................................................................................................................................................................................................................................................................... 16 3 6.67 6.67 0.33 - 1.33 - - - 3.67 - - 0.33 - - - - 0.33 - - - 0.67 -
......TGAATATCCAGAAGATGCAGAAAACTC............................................................................................................................................................................................................................................................................................................................................................................................................................ 27 1 5.00 5.00 - - - - - - - - 2.00 - 2.00 - 1.00 - - - - - - -
.......................................................................................................................ACATGATCTAGGAGGCtgca.................................................................................................................................................................................................................................................................................................................. 20 tgca 3.67 6.67 - 0.67 - 2.00 - 0.67 - - - - - - - - - - - - - 0.33
.......................................................................................................................ACATGATCTAGGAGGCAaa................................................................................................................................................................................................................................................................................................................... 19 aa 2.00 23.00 2.00 - - - - - - - - - - - - - - - - - - -
.......................................................................................................................ACATGATCTAGGAGGCAaaaa................................................................................................................................................................................................................................................................................................................. 21 aaaa 2.00 23.00 1.00 - - 1.00 - - - - - - - - - - - - - - - -
.........................................................................................................................ATGATCTAGGAGGCtgca.................................................................................................................................................................................................................................................................................................................. 18 tgca 2.00 0.00 - 2.00 - - - - - - - - - - - - - - - - - -
........................................................................................................................CATGATCTAGGAGGCAa.................................................................................................................................................................................................................................................................................................................... 17 a 2.00 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - -
.......................................................................................................................ACATGATCTAGGAGG....................................................................................................................................................................................................................................................................................................................... 15 6 1.33 1.33 0.33 - - - - 0.17 - - - 0.33 - - - 0.33 - - - - - 0.17
.......................................................................................................................ACATGATCTAGGAGGCAta................................................................................................................................................................................................................................................................................................................... 19 ta 1.00 23.00 - 1.00 - - - - - - - - - - - - - - - - - -
.......................................................................................................................ACATGATCTAGGAGaac..................................................................................................................................................................................................................................................................................................................... 17 aac 1.00 0.00 1.00 - - - - - - - - - - - - - - - - - - -
.......GAATATCCAGAAGATGCAGAAAACTCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................... 28 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - -
.......................................................................................................................ACATGATCTAGGAGGCAGAAa................................................................................................................................................................................................................................................................................................................. 21 a 1.00 0.00 - - - - - 1.00 - - - - - - - - - - - - - -
..........TATCCAGAAGATGCAGAAAACTCAGGT........................................................................................................................................................................................................................................................................................................................................................................................................................ 27 1 1.00 1.00 - - - - - - - - - - - - 1.00 - - - - - - -
.......................................................................................................................ACATGATCTAGGAGaaa..................................................................................................................................................................................................................................................................................................................... 17 aaa 1.00 0.00 1.00 - - - - - - - - - - - - - - - - - - -
.......................................................................................................................ACATGATCTAGGAGaca..................................................................................................................................................................................................................................................................................................................... 17 aca 1.00 0.00 1.00 - - - - - - - - - - - - - - - - - - -
.......................................................TGGAAAAAGTGAGTACGTGAGCAACGCCG......................................................................................................................................................................................................................................................................................................................................................................... 29 1 1.00 1.00 - - - - - - - - - - - - - - - 1.00 - - - -
.......................................................................................................................ACATGATCTAGGAGcaa..................................................................................................................................................................................................................................................................................................................... 17 caa 1.00 0.00 - 1.00 - - - - - - - - - - - - - - - - - -
......................................................................................................................................................................................................................................................................................................CAGCCTGGAACTGGAGTGCac.................................................................................................................................. 21 ac 1.00 0.00 - - - - - - - - - - - - - - - - 1.00 - - -
........................................................................................................................CATGATCTAGGAGGCA..................................................................................................................................................................................................................................................................................................................... 16 1 1.00 1.00 - - - - - - - - - - - - - 1.00 - - - - - -
.......................................................................................................................ACATGATCTAGGAGGCAaca.................................................................................................................................................................................................................................................................................................................. 20 aca 1.00 23.00 - 1.00 - - - - - - - - - - - - - - - - - -
.......................................................................................................................ACATGATCTAGGAGGCtga................................................................................................................................................................................................................................................................................................................... 19 tga 1.00 6.67 - - - - - - - - - 0.67 - - - - - - - 0.33 - -
........................................................................................................................CATGATCTAGGAGGaaca................................................................................................................................................................................................................................................................................................................... 18 aaca 1.00 0.00 1.00 - - - - - - - - - - - - - - - - - - -
........AATATCCAGAAGATGCAGAAAACTC............................................................................................................................................................................................................................................................................................................................................................................................................................ 25 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - -
......TGAATATCCAGAAGATGCAGAAAACTCA........................................................................................................................................................................................................................................................................................................................................................................................................................... 28 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - -
.......................................................................................................................ACATGATCTAGGAGGa...................................................................................................................................................................................................................................................................................................................... 16 a 0.83 1.33 0.17 - - - - 0.33 - - - - - - - 0.17 - - - 0.17 - -
.......................................................................................................................ACATGATCTAGGAGGCta.................................................................................................................................................................................................................................................................................................................... 18 ta 0.67 6.67 0.33 - - - - - - - - - - - - 0.33 - - - - - -
........................................................................................................................CATGATCTAGGAGGC...................................................................................................................................................................................................................................................................................................................... 15 4 0.50 0.50 0.25 - - - - - - - - - - - - - 0.25 - - - - -
.......................................................................................................................ACATGATCTAGGAGGCtgaa.................................................................................................................................................................................................................................................................................................................. 20 tgaa 0.33 6.67 - - - 0.33 - - - - - - - - - - - - - - - -
.......................................................................................................................ACATGATCTAGGAGGCtac................................................................................................................................................................................................................................................................................................................... 19 tac 0.33 6.67 - - - - - - - - - - - - - - - - - 0.33 - -
.......................................................................................................................ACATGATCTAGGAGGaca.................................................................................................................................................................................................................................................................................................................... 18 aca 0.33 1.33 0.17 - - - - - - - - - - - - - - - - 0.17 - -
.......................................................................................................................ACATGATCTAGGAGGCcaca.................................................................................................................................................................................................................................................................................................................. 20 caca 0.33 6.67 - - 0.33 - - - - - - - - - - - - - - - - -
.......................................................................................................................ACATGATCTAGGAGGCtaca.................................................................................................................................................................................................................................................................................................................. 20 taca 0.33 6.67 - 0.33 - - - - - - - - - - - - - - - - - -
.......................................................................................................................ACATGATCTAGGAGGCgca................................................................................................................................................................................................................................................................................................................... 19 gca 0.33 6.67 - 0.33 - - - - - - - - - - - - - - - - - -
.......................................................................................................................ACATGATCTAGGAGGacca................................................................................................................................................................................................................................................................................................................... 19 acca 0.33 1.33 - - - 0.33 - - - - - - - - - - - - - - - -
.......................................................................................................................ACATGATCTAGGAGGCca.................................................................................................................................................................................................................................................................................................................... 18 ca 0.33 6.67 - 0.33 - - - - - - - - - - - - - - - - - -
........................................................................................................................CATGATCTAGGAGGCtgca.................................................................................................................................................................................................................................................................................................................. 19 tgca 0.25 0.50 - 0.25 - - - - - - - - - - - - - - - - - -
.......................................................................................................................ACATGATCTAGGAGGaaaa................................................................................................................................................................................................................................................................................................................... 19 aaaa 0.17 1.33 0.17 - - - - - - - - - - - - - - - - - - -
.......................................................................................................................ACATGATCTAGGAGGacaa................................................................................................................................................................................................................................................................................................................... 19 acaa 0.17 1.33 0.17 - - - - - - - - - - - - - - - - - - -

Antisense strand
ATCTCCTGAATATCCAGAAGATGCAGAAAACTCAGGTGAAGTGCCGCAAGGTGAGTGGAAAAAGTGAGTACGTGAGCAACGCCGGGCCAACAGGTTCTTCCTCTGGCTCCCACCACTGGACATGATCTAGGAGGCAGAATTCAAAGCCCAGTGCTGCCACTTAATGCTATGTGATTATGGCCAAATCACTTTGCCTCTCCGGGCTCGATTTGCTTCTCCATATAATGGGTATACTAGCGGTGCTCCCTCCCTGATCAGAAAGTTGTGCTCACTGAGGATTCCGTACTCTCAATACAGCCTGGAACTGGAGTGCTACGTCATGATTACCTTTTCCTATGCTCATCATTACTTGCGTGTCTGATCGCTTGCTCCCCCCACCCCCTCCCGAACCTTAGGTTCTTACCAAGATGAAGCAGCAGGCATACGATTCATGGCCAGAAGCCGA


 Size Perfect hit Total Norm Perfect Norm SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes) 		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes) 		mjTestesWT2()
Testes Data. (testes) 		mjTestesKO7()
Testes Data. (Zcchc11 testes) 		mjTestesKO6()
Testes Data. (Zcchc11 testes) 		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes) 		mjTestesWT1()
Testes Data. (testes) 		mjTestesWT4()
Testes Data. (testes) 		SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes) 		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes) 		SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes) 		SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes) 		SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes) 		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes) 		mjTestesWT3()
Testes Data. (testes) 		SRR014233(GSM319957)
16.5 dpc MIWI2. (miwi2 testes) 		GSM475281(GSM475281)
total RNA. (testes) 		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes) 		mjTestesKO5()
Testes Data. (Zcchc11 testes) 		mjTestesKO8()
Testes Data. (Zcchc11 testes)