| Gene: Raver1 | ID: uc009okc.1_intron_4_0_chr9_20879941_r | SPECIES: mm9 |
|
|
|
(1) OTHER.ip |
(2) OTHER.mut |
(3) PIWI.ip |
(1) PIWI.mut |
(12) TESTES |
| GGCTCCTGGGCCTGGGCCCTGGGCCCAATGGTCACAGTCACCTGCTGAAGGTACGGGCAGGAGGAGGGGAGGCACAGGGCTGGGCAACCCTGGCTCTGGGAGGCCACTGACCTGGCCCCCCTTGCTGTCTGTCTCCAGACCCCACTGGGTGGCCAGAAACGCAGTTTTTCCCACCTGCTGCCCTCACC ....................................................((((((((...((((((.(((.((((....(((..(((.......)))..))).....))))))))))))).))))))))........................................................ ..................................................51.....................................................................................138................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR051939(GSM545783) Mov10L1-associated piRNAs. (mov10L testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR363956(GSM822758) P14-WTSmall RNA Miwi IPread_length: 36. (testes) | mjTestesWT3() Testes Data. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................GTACGGGCAGGAGGAGGGGAGGCAtt................................................................................................................ | 26 | tt | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ....................................................ACGGGCAGGAGGAGGGGAGGCACAGG.............................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .......................CCCAATGGTCACAGTCACCTGCTGAAGacc....................................................................................................................................... | 30 | acc | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...................................................TACGGGCAGGAGGAGGGGAGGCACAGG.............................................................................................................. | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................TACGGGCAGGAGGAGGGGAGGCACt................................................................................................................ | 25 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ...................................................TACGGGCAGGAGGAGGGGAGGCACAa............................................................................................................... | 26 | a | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................GCCCCCCTTGCTGTCTGTCTC..................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ...................................................TACGGGCAGGAGGAGGGGAGGCAa................................................................................................................. | 24 | a | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTACGGGCAGGAGGAGGGGgt..................................................................................................................... | 21 | gt | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...................................................TACGGGCAGGAGGAGGGGAGGCA.................................................................................................................. | 23 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................GCCCCCCTTGCTGTCTGTCTCC.................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ..................................................GTACGGGCAGGAGGAGGGGAGGCACAGG.............................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..................................................GTACGGGCAGGAGGAGGGGAGGCACAttt............................................................................................................. | 29 | ttt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ..........................................................................................................................TGCTGTCTGTCTCCAGA................................................. | 17 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | 0.50 |
| GGCTCCTGGGCCTGGGCCCTGGGCCCAATGGTCACAGTCACCTGCTGAAGGTACGGGCAGGAGGAGGGGAGGCACAGGGCTGGGCAACCCTGGCTCTGGGAGGCCACTGACCTGGCCCCCCTTGCTGTCTGTCTCCAGACCCCACTGGGTGGCCAGAAACGCAGTTTTTCCCACCTGCTGCCCTCACC ....................................................((((((((...((((((.(((.((((....(((..(((.......)))..))).....))))))))))))).))))))))........................................................ ..................................................51.....................................................................................138................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR051939(GSM545783) Mov10L1-associated piRNAs. (mov10L testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR363956(GSM822758) P14-WTSmall RNA Miwi IPread_length: 36. (testes) | mjTestesWT3() Testes Data. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................CAGTCACCTGCTGAAGGTACGGGCAGGA.............................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ..............................................................................................................................................CACTGGGTGGCCAGAAACGCAGTTT..................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - |