| Gene: MRPL4 | ID: uc009oju.1_intron_0_0_chr9_20807442_f | SPECIES: mm9 |
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(4) OTHER.mut |
(4) PIWI.ip |
(1) PIWI.mut |
(17) TESTES |
| GGTTGTTCCAGGCCGCTTCCCGGGCCTCGCTTCGACTCTCTGGCTCCCGGGTAGGGCACTGAGCTGAGGTCAAGGCCGGAGGTCAAAGGTTGAGAACCTCCGAGAGCACCTCTAACTCCCGCCTGTCATTTTCCAGGTCATCCACTCTCTAGCGGAAGGCGCGGAGCGGCCGGCCGAGATTTCAGA |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesWT2() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................GTAGGGCACTGAGCTGAGGTCAAGGC.............................................................................................................. | 26 | 1 | 10.00 | 10.00 | 4.00 | 1.00 | - | 1.00 | - | 1.00 | - | 2.00 | 1.00 | - | - | - | - | - | - | - | - |
| ..................................................GTAGGGCACTGAGCTGAGGTCAAGGCC............................................................................................................. | 27 | 1 | 4.00 | 4.00 | 2.00 | - | - | - | - | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - |
| ..................................................GTAGGGCACTGAGCTGAGGTCAAGG............................................................................................................... | 25 | 1 | 4.00 | 4.00 | 1.00 | 1.00 | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTAGGGCACTGAGCTGAGGTCAAG................................................................................................................ | 24 | 1 | 3.00 | 3.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ...................................................TAGGGCACTGAGCTGAGGTCAAGGCCGG........................................................................................................... | 28 | 1 | 2.00 | 2.00 | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................AGCGGAAGGCGCGGAGCGGCCGG............. | 23 | 1 | 2.00 | 2.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTAGGGCACTGAGCTGAGGTCAAGGt.............................................................................................................. | 26 | t | 2.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | 1.00 | - | - | - | - | - |
| ..................................................GTAGGGCACTGAGCTGAGGTCAAGGa.............................................................................................................. | 26 | a | 2.00 | 4.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .....................................................................................................................................................TAGCGGAAGGCGCGGAGCGGCCGGt............ | 25 | t | 2.00 | 0.00 | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................TCTCTAGCGGAAGGCGCGGAGCGGCCGGt............ | 29 | t | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTAGGGCACTGAGCTGAGGTa................................................................................................................... | 21 | a | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................TAGCGGAAGGCGCGGAGCGGCCGGC............ | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ..................................................GTAGGGCACTGAGCTGAGGTCAAGGCCG............................................................................................................ | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .............................................CCCGGGTAGGGCACTGAGCTGAGGTCA.................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ......................................TCTGGCTCCCGGGTAGGG.................................................................................................................................. | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................TAGCGGAAGGCGCGGAGCGGCCGGta........... | 26 | ta | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................TCTAGCGGAAGGCGCGGAGCGGCC............... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ................................................GGGTAGGGCACTGAG........................................................................................................................... | 15 | 11 | 0.09 | 0.09 | - | 0.09 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| GGTTGTTCCAGGCCGCTTCCCGGGCCTCGCTTCGACTCTCTGGCTCCCGGGTAGGGCACTGAGCTGAGGTCAAGGCCGGAGGTCAAAGGTTGAGAACCTCCGAGAGCACCTCTAACTCCCGCCTGTCATTTTCCAGGTCATCCACTCTCTAGCGGAAGGCGCGGAGCGGCCGGCCGAGATTTCAGA |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesWT2() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..TCCAGGCCGCTTCtatt....................................................................................................................................................................... | 17 | tatt | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................CATTTTCCAGGTCATCCACTCTCTA................................... | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................CATTTTCCAGGTCATCCACTCTCTAt................................... | 26 | t | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................GCCGGCCGAGATTTCAGA | 18 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |