| Gene: Endod1 | ID: uc009oem.1_intron_1_0_chr9_14185295_r.3p | SPECIES: mm9 |
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(7) OTHER.mut |
(1) OVARY |
(1) PIWI.ip |
(14) TESTES |
| CTTGGCCCAGAGCCGCCCCGCCAGAGAGGCTCACCGCGGACTTCCCTGCTCTAGCGGCGCCCGGCCGCGCAGAGGCCGCCATGGGCTGTGCGCGCTGGCTGGCGCTGGGCGGCCTCCTGGCCCTGGCAGGGCTGTTGCAGGCCCGGCTGCTGCTCCCGCAGCAAGCGGGCTTCGGCGAATGCGACCGTTTCTTCTACAAGGGGACCCCACCCGCCGGGCTGGCGACCGAAGCGCACGTGAGGATCTGTCA |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | mjTestesWT2() Testes Data. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | mjTestesWT3() Testes Data. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesWT4() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR037897(GSM510433) ovary_rep2. (ovary) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | SRR029040(GSM433292) 6w_hetero_tdrd6-KO. (tdrd6 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ......................................................................AGAGGCCGCCATGGGCTGTGCGCGC........................................................................................................................................................... | 25 | 1 | 13.00 | 13.00 | - | 5.00 | - | 2.00 | - | 1.00 | - | - | 1.00 | 3.00 | - | 1.00 | - | - | - |
| ...............................................................................CATGGGCTGTGCGCGCTGGC....................................................................................................................................................... | 20 | 1 | 11.00 | 11.00 | - | - | 11.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................ATGGGCTGTGCGCGCTGGC....................................................................................................................................................... | 19 | 1 | 11.00 | 11.00 | 10.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...............................................................................CATGGGCTGTGCGCGCTGGCTGGC................................................................................................................................................... | 24 | 1 | 9.00 | 9.00 | 9.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................GGCAGGGCTGTTGCAGGC............................................................................................................ | 18 | 1 | 9.00 | 9.00 | 9.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................TGGGCTGTGCGCGCTGGC....................................................................................................................................................... | 18 | 1 | 5.00 | 5.00 | - | 1.00 | - | 4.00 | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................GCCATGGGCTGTGCGCGCTGG........................................................................................................................................................ | 21 | 1 | 4.00 | 4.00 | - | - | - | - | 4.00 | - | - | - | - | - | - | - | - | - | - |
| ................................................................................ATGGGCTGTGCGCGCTGGCTGG.................................................................................................................................................... | 22 | 1 | 3.00 | 3.00 | - | - | - | - | - | - | - | 3.00 | - | - | - | - | - | - | - |
| ....................................CGGACTTCCCTGCTCTAGCGG................................................................................................................................................................................................. | 21 | 1 | 3.00 | 3.00 | - | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................GCCGCCATGGGCTGTGCG.............................................................................................................................................................. | 18 | 1 | 2.00 | 2.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - |
| ...............................................................................CATGGGCTGTGCGCGCTGGCTGGCGC................................................................................................................................................. | 26 | 1 | 2.00 | 2.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................ATGGGCTGTGCGCGCTGGCTGGCGCTGGGC............................................................................................................................................ | 30 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................CCGCCATGGGCTGTGCG.............................................................................................................................................................. | 17 | 1 | 2.00 | 2.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................GCTGTGCGCGCTGGCTGGC................................................................................................................................................... | 19 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................TGTGCGCGCTGGCTGGCGCTGGGCGG.......................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .........................................................................GGCCGCCATGGGCTGTGCGC............................................................................................................................................................. | 20 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................AGAGGCCGCCATGGGCTGTGCGCGCT.......................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .............................................................................GCCATGGGCTGTGCGCGC........................................................................................................................................................... | 18 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................TGGGCTGTGCGCGCTGGCTGGCGCTGG.............................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ....................................................................GCAGAGGCCGCCATGGGCTGT................................................................................................................................................................. | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .....................................................................CAGAGGCCGCCATGGGCTGTGC............................................................................................................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ........................................................................AGGCCGCCATGGGCTGTGCG.............................................................................................................................................................. | 20 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................ATGGGCTGTGCGCGCTGG........................................................................................................................................................ | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ....................................................................................GCTGTGCGCGCTGGCTGGCGCTGGG............................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| .......................................................................GAGGCCGCCATGGGCTGT................................................................................................................................................................. | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ............................................................................CGCCATGGGCTGTGCGCGCTGGCgggc................................................................................................................................................... | 27 | gggc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| CTTGGCCCAGAGCCGCCCCGCCAGAGAGGCTCACCGCGGACTTCCCTGCTCTAGCGGCGCCCGGCCGCGCAGAGGCCGCCATGGGCTGTGCGCGCTGGCTGGCGCTGGGCGGCCTCCTGGCCCTGGCAGGGCTGTTGCAGGCCCGGCTGCTGCTCCCGCAGCAAGCGGGCTTCGGCGAATGCGACCGTTTCTTCTACAAGGGGACCCCACCCGCCGGGCTGGCGACCGAAGCGCACGTGAGGATCTGTCA |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | mjTestesWT2() Testes Data. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | mjTestesWT3() Testes Data. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesWT4() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR037897(GSM510433) ovary_rep2. (ovary) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | SRR029040(GSM433292) 6w_hetero_tdrd6-KO. (tdrd6 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .............................................................................................................................................................................GGCGAATGCGACCGTTTCTTCTACA.................................................... | 25 | 1 | 4.00 | 4.00 | - | - | - | - | - | - | 4.00 | - | - | - | - | - | - | - | - |
| ..........................AGGCTCACCGCGGACTTCCCTGCTCTA..................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ...............................................................................................................................................................................................................................GACCGAAGCGCACGTGAGGATCTGTCA | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |