| Gene: Cep57 | ID: uc009oec.1_intron_7_0_chr9_13622889_r | SPECIES: mm9 |
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(1) OTHER.mut |
(3) PIWI.ip |
(1) PIWI.mut |
(15) TESTES |
| GATCCAAGAGAGGGAGAACTCAAAGAATGAAGAATCAAAGCACAATCAAGGTGTGTTTAATTATAAAGGAAACTAAAATCTATCCAAATACTGTAAGTTAGTTCACAATTCCACATTGGTATTTTGTAGTGGTCACTGGTAAGGAATTACATCATAATCATGTGTATTGTGAGGAGCAAGTGACGTCGTGCATAGTGCTTACTGGCAGTGTGTGGCATATTTGACGCAAGTAAGAAAGATCCTAAAGTCGTCCGGAAAGGTTTTGAGGAGTACTGAAAGGGAAGAGGCTGAAGGCCGGGAGGGCTGCTGTTTTCTTTTGTGGTACTCTGGCATACCGAGCAGGCACTCTACCGTGAACCTTACCTATGCCCCATGAATTTACTGCAAGTTCACTTCCTGCTTACAAGCTGTTGGGACAAGACTGTCTTAACTAATTACTACTTTTTTGTATGTATTCATTTTAGAACTGGCATCCCAGTTGGTAGCTGCAGAAAATAAATGTAATCTTCTAGAA |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR363958(GSM822760) Adult-WTSmall RNA Miwi IP. (testes) | mjTestesWT1() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT4() Testes Data. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
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| .................................................................................................................................................................................................................................................CTAAAGTCGTCCGGAAAGGTTTTGAGGAGTACTGAAAGGGAAGAGGCTGAAG............................................................................................................................................................................................................................. | 52 | 1 | 186.00 | 186.00 | 186.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......AGAGAGGGAGAACTCAAAGAATGAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 26 | 1 | 2.00 | 2.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................TGTGTATTGTGAGGAGCAAGTGACGT........................................................................................................................................................................................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ....................CAAAGAATGAAGAATCAAAGCACAATCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ........AGAGGGAGAACTCAAAGAATGAAGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ..................CTCAAAGAATGAAGAATCg............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 19 | g | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...........................TGAAGAATCAAAGCACAATCAAGaact............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ | 27 | aact | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ............GGAGAACTCAAAGAATGAAGAATCAAAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ | 30 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............GAACTCAAAGAATGAAGAATC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ......................AAGAATGAAGAATCAAAGCACAATCAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ....................CAAAGAATGAAGAATCAAAGCACAATC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......AGAGAGGGAGAACTCAAAGAATGAAGAATC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ......AGAGAGGGAGAACTCAAAGAATGAAGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..........AGGGAGAACTCAAAGAATGAAGAATCAAAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 31 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................TGAAGAATCAAAGCACAATCAAGaac............................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 26 | aac | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ....................CAAAGAATGAAGAATCAAAGCACAATCAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 29 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................CAAAGAATGAAGAATCAAAGCACAATCAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| GATCCAAGAGAGGGAGAACTCAAAGAATGAAGAATCAAAGCACAATCAAGGTGTGTTTAATTATAAAGGAAACTAAAATCTATCCAAATACTGTAAGTTAGTTCACAATTCCACATTGGTATTTTGTAGTGGTCACTGGTAAGGAATTACATCATAATCATGTGTATTGTGAGGAGCAAGTGACGTCGTGCATAGTGCTTACTGGCAGTGTGTGGCATATTTGACGCAAGTAAGAAAGATCCTAAAGTCGTCCGGAAAGGTTTTGAGGAGTACTGAAAGGGAAGAGGCTGAAGGCCGGGAGGGCTGCTGTTTTCTTTTGTGGTACTCTGGCATACCGAGCAGGCACTCTACCGTGAACCTTACCTATGCCCCATGAATTTACTGCAAGTTCACTTCCTGCTTACAAGCTGTTGGGACAAGACTGTCTTAACTAATTACTACTTTTTTGTATGTATTCATTTTAGAACTGGCATCCCAGTTGGTAGCTGCAGAAAATAAATGTAATCTTCTAGAA |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR363958(GSM822760) Adult-WTSmall RNA Miwi IP. (testes) | mjTestesWT1() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT4() Testes Data. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
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