| Gene: 1300018I17Rik | ID: uc009nus.1_intron_4_0_chr8_125769974_r.3p | SPECIES: mm9 |
|
|
|
(2) OTHER.mut |
(4) PIWI.ip |
(2) PIWI.mut |
(17) TESTES |
| AGCATAGGCAAGGGAAGGGGATGAGAGGCTGAGCAACTAGAACAACCAGGTAGAACAGCCCCAAAGCCTAGATGCTGTAGCTCTGCTCTACAGGAGCTGGATCTGGTAAACAGGACGCCTTGACTTTGAACTTAGAGCTGCTAGAGATGTGGGGGGCAGGCAGTAGCACATTTGGACATTGCAAACTCTGCTCCTGGCAGATAGACTGCTCTCGCTGACCCTTTTGGCCTTCGAAAGCCTGAACACAGCC ...........................................................................................................................(((((....)))))(((((((.((.((((((.((((.(((........)))....))))...))))))))))))))).................................................. .........................................................................................................................122...........................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..............................................................................................................................TGAACTTAGAGCTGCTAGAGATGTGG.................................................................................................. | 26 | 1 | 30.00 | 30.00 | 11.00 | 5.00 | 8.00 | 3.00 | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................TGAACTTAGAGCTGCTAGAGATGTG................................................................................................... | 25 | 1 | 14.00 | 14.00 | 3.00 | 4.00 | 2.00 | 1.00 | 1.00 | - | 1.00 | - | - | - | 1.00 | - | - | - | - | 1.00 | - |
| .............................................................................................................................TTGAACTTAGAGCTGCTAGAGATGTG................................................................................................... | 26 | 1 | 12.00 | 12.00 | 2.00 | 4.00 | 2.00 | - | - | 1.00 | 2.00 | - | - | - | - | - | 1.00 | - | - | - | - |
| ............................................................................................................................................................................TGGACATTGCAAACTCTGCTCCTGGCA................................................... | 27 | 1 | 6.00 | 6.00 | 1.00 | 1.00 | 3.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................TGACTTTGAACTTAGAGCTGCTAGAGA....................................................................................................... | 27 | 1 | 6.00 | 6.00 | 3.00 | 1.00 | - | - | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .....................................TAGAACAACCAGGTAGAACAGCCCCAAA......................................................................................................................................................................................... | 28 | 1 | 5.00 | 5.00 | 1.00 | 1.00 | 1.00 | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................TGGCAGATAGACTGCTCTCGCTGACCC............................. | 27 | 1 | 5.00 | 5.00 | - | 1.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................TGGACATTGCAAACTCTGCTCCTGGCAG.................................................. | 28 | 1 | 5.00 | 5.00 | - | 2.00 | - | - | 2.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ................................GCAACTAGAACAACCAGGTAGAACAGCCCC............................................................................................................................................................................................ | 30 | 1 | 4.00 | 4.00 | 2.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................TAGAACAACCAGGTAGAACAGCCCCA........................................................................................................................................................................................... | 26 | 1 | 4.00 | 4.00 | 2.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................TTGGACATTGCAAACTCTGCTCCTGGC.................................................... | 27 | 1 | 3.00 | 3.00 | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ........................................................................................................................TGACTTTGAACTTAGAGCTGCTAGAGATG..................................................................................................... | 29 | 1 | 3.00 | 3.00 | 1.00 | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................TGGACATTGCAAACTCTGCTCCTGGCAGA................................................. | 29 | 1 | 3.00 | 3.00 | - | 1.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................TTTGAACTTAGAGCTGCTAGAGATGT.................................................................................................... | 26 | 1 | 3.00 | 3.00 | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................TGAGCAACTAGAACAACCAGGTAGAACA................................................................................................................................................................................................. | 28 | 1 | 3.00 | 3.00 | - | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................TGAACTTAGAGCTGCTAGAGATGTGGG................................................................................................. | 27 | 1 | 3.00 | 3.00 | 1.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................TGACTTTGAACTTAGAGCTGCTAGAGAT...................................................................................................... | 28 | 1 | 2.00 | 2.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................TACAGGAGCTGGATCTGGTAAACAGGAC...................................................................................................................................... | 28 | 1 | 2.00 | 2.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................TTTGAACTTAGAGCTGCTAGAGATGTG................................................................................................... | 27 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................TACAGGAGCTGGATCTGGTAAACAGGA....................................................................................................................................... | 27 | 1 | 2.00 | 2.00 | - | - | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................TTGAACTTAGAGCTGCTAGAGATGT.................................................................................................... | 25 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................TGGACATTGCAAACTCTGCTCCTGGCAGAT................................................ | 30 | 1 | 2.00 | 2.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................TGCTGTAGCTCTGCTCTACAGGAGCTGG...................................................................................................................................................... | 28 | 1 | 2.00 | 2.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................CAGGACGCCTTGACTTTGAACTTAGAGC................................................................................................................ | 28 | 1 | 2.00 | 2.00 | - | - | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................TTGAACTTAGAGCTGCTAGAGATGTGG.................................................................................................. | 27 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................TGCAAACTCTGCTCCTGGCAGATAGACTG.......................................... | 29 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................AGGACGCCTTGACTTTGAACTTAGAGC................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................GACTTTGAACTTAGAGCTGCTAGAGATG..................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..............................................................................................................................TGAACTTAGAGCTGCTAGAGATGT.................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ........................................................................................TACAGGAGCTGGATCTGGTAAACAG......................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ...................GATGAGAGGCTGAGCAACTAGA................................................................................................................................................................................................................. | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ....................................................................................................................................TAGAGCTGCTAGAGATGTGGGGGGCA............................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .......................................GAACAACCAGGTAGAACAGCCCCAAAGC....................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................TGACTTTGAACTTAGAGCTGCTAGAGATGT.................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................TAAACAGGACGCCTTGACTTTGAACTTAGAG................................................................................................................. | 31 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................AGATGCTGTAGCTCTGCTCTACAGGAGCTGt...................................................................................................................................................... | 31 | t | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................TAGCACATTTGGACATTGCAAACTCTGC........................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| .......................................GAACAACCAGGTAGAACAGCCCCAAAGCC...................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................AAACAGGACGCCTTGACTTTGAACT...................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................TGAACTTAGAGCTGCTAGAGA....................................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ............................................................................................GGAGCTGGATCTGGTAAACAGGACGCCT.................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................AGGCAGTAGCACATTTGGACATTGCAAAC................................................................ | 29 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................TGAGAGGCTGAGCAACTAGAACAACC........................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................CTTTGAACTTAGAGCTGCTAGAGATG..................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................GATGAGAGGCTGAGCAACTAGAACAACC........................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................TGAACTTAGAGCTGCTAGAGATGTGGGG................................................................................................ | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..............................................................................................................................TGAACTTAGAGCTGCTAGAGATGTGGGGt............................................................................................... | 29 | t | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................GAACAACCAGGTAGAACAGCCCCAAA......................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..........................................................................................................................ACTTTGAACTTAGAGCTGCTAGAGATGT.................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................GAGCTGCTAGAGATGTGGGGGGCAG........................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ....................................CTAGAACAACCAGGTAGAACAGCCCCAAA......................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................ACTTTGAACTTAGAGCTGCTAGAGATG..................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................TGGCAGATAGACTGCTCTCGCTGACCCTT........................... | 29 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................TTGGACATTGCAAACTCTGCTCCTGGCA................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................GATAGACTGCTCTCGCTGACCCTTTTGGC...................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................TAGACTGCTCTCGCTGACCCTTTTGGCat.................... | 29 | at | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................TGAGCAACTAGAACAACCAGGTAGAACAGC............................................................................................................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................GAGGCTGAGCAACTAGAACAACCAGG........................................................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...............................AGCAACTAGAACAACCAGGTAGAACAGCCC............................................................................................................................................................................................. | 30 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................AGGAGCTGGATCTGGTAAACAGGACGCC................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................TCTGCTCCTGGCAGATAGACTGCTCT...................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................TGCTGTAGCTCTGCTCTACAGGAGCTGt...................................................................................................................................................... | 28 | t | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................CAACTAGAACAACCAGGTAGAACAGCCCC............................................................................................................................................................................................ | 29 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| AGCATAGGCAAGGGAAGGGGATGAGAGGCTGAGCAACTAGAACAACCAGGTAGAACAGCCCCAAAGCCTAGATGCTGTAGCTCTGCTCTACAGGAGCTGGATCTGGTAAACAGGACGCCTTGACTTTGAACTTAGAGCTGCTAGAGATGTGGGGGGCAGGCAGTAGCACATTTGGACATTGCAAACTCTGCTCCTGGCAGATAGACTGCTCTCGCTGACCCTTTTGGCCTTCGAAAGCCTGAACACAGCC ...........................................................................................................................(((((....)))))(((((((.((.((((((.((((.(((........)))....))))...))))))))))))))).................................................. .........................................................................................................................122...........................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...................................GAACAACCAGGTActgc...................................................................................................................................................................................................... | 17 | ctgc | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |