| Gene: Cdk10 | ID: uc009nun.1_intron_8_0_chr8_125754228_f | SPECIES: mm9 |
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(1) OTHER.ip |
(8) OTHER.mut |
(5) PIWI.ip |
(2) PIWI.mut |
(1) TDRD1.ip |
(31) TESTES |
| CCAGAGCTGCTGCTTGGAACTACCACCCAGACTACCAGCATTGACATGTGGTAGGCGTGGTTTCTGCTCCCAGGGCCTCAAGTCTTCTGGCCCTGGAGGTCAGCCCTGGTCAGGGGGAGCAGGATTGGTGTGGTAGAGAGCCTGACTGCAGCATCCAAGGAGGGGGAGCACGAGAACATGGCTGGGGTGCTCACTGGCTCCGGCCTCAGGTTCTCACTTGGCACTGCAGACCTTGTGGGAGAGCCTTATGGCCATTTGCCTGCTTCTTCACGTGTGTGTTGATTCGTTGCTAAGTGGAGGTCGGCTGCTTCTACAGGGCTGTCGGCTGCATCCTGGCAGAGCTGCTGGCCCATAAGCCCCTCCTCC .........................................................................................................................................................................................................................((((((..(((.((..((((((..(((.....(((.....))).)))..)))))).)).)))........))))))((((((((.....)))))))).................................................... ........................................................................................................................................................................................................................217................................................................................................316................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | mjTestesWT3() Testes Data. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | SRR028731(GSM400968) Mili-wt-associated. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | mjTestesWT2() Testes Data. (testes) | mjTestesWT4() Testes Data. (testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR363958(GSM822760) Adult-WTSmall RNA Miwi IP. (testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR051939(GSM545783) Mov10L1-associated piRNAs. (mov10L testes) | GSM475281(GSM475281) total RNA. (testes) | SRR029040(GSM433292) 6w_hetero_tdrd6-KO. (tdrd6 testes) | SRR363957(GSM822759) P20-WTSmall RNA Miwi IPread_length: 36. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR028730(GSM400967) Tdrd1-associated. (tdrd1 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR363956(GSM822758) P14-WTSmall RNA Miwi IPread_length: 36. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .......................CACCCAGACTACCAGCATTGACATGTGGgc......................................................................................................................................................................................................................................................................................................................... | 30 | gc | 2.00 | 0.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................TGTGTTGATTCGTTGCTAAGTGGAGG.................................................................. | 26 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................TGATTCGTTGCTAAGTGGAGGTCGGCT............................................................ | 27 | 1 | 2.00 | 2.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............TTGGAACTACCACCCAGACTACCAGCAT..................................................................................................................................................................................................................................................................................................................................... | 28 | 2 | 2.00 | 2.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................TACCACCCAGACTACCAGCATTGACAT............................................................................................................................................................................................................................................................................................................................... | 27 | 2 | 1.50 | 1.50 | - | 0.50 | - | - | - | - | 0.50 | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................TACCACCCAGACTACCAGCATTGACATG.............................................................................................................................................................................................................................................................................................................................. | 28 | 2 | 1.50 | 1.50 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................TTCTTCACGTGTGTGTTGATTCGTTGCT........................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................TGATTCGTTGCTAAGTGGAGGTCGG.............................................................. | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................GACTACCAGCATTGACATGTGGgct........................................................................................................................................................................................................................................................................................................................ | 25 | gct | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................TGGTAGGCGTGGTTTCTGCTCCCAGG.................................................................................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................................................................TGCTTCTACAGGGCTGTCGGCTGC..................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................................................TCCTGGCAGAGCTGCTGGCacat............. | 23 | acat | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................................................................................TGCATCCTGGCAGAGCTGCTGGCCCA.............. | 26 | 2 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................TTCTTCACGTGTGTGTTGATTCGTTtct........................................................................... | 28 | tct | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................GCCTGACTGCAGCATCCAAGGAGGG.......................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................................TTGATTCGTTGCTAAGTGGAGGTCG............................................................... | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................................TGTTGATTCGTTGCTAAGTGGAG................................................................... | 23 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................................................................................GCTGCTTCTACAGGGCTGTCGGCTGCATC.................................. | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................TGGTGTGGTAGAGAGCCTGAC............................................................................................................................................................................................................................ | 21 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................ACATGTGGTAGGCGTGGTTTCTGCT.......................................................................................................................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .........................................................................................................................................................................................................................TTGGCACTGCAGACCTTGTGGGAG............................................................................................................................. | 24 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................TTCACGTGTGTGTTGATTCGTTGCTA.......................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............TGGAACTACCACCCAGACTACCcgc....................................................................................................................................................................................................................................................................................................................................... | 25 | cgc | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................TTCACGTGTGTGTTGATTCGTTGC............................................................................ | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................TTCACGTGTGTGTTGATTCGTTGCTAA......................................................................... | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................................GTGTGTTGATTCGTTGCTAAGTGGA.................................................................... | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................................................TACAGGGCTGTCGGCTGCATCCTtt.............................. | 25 | tt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................TGATTCGTTGCTAAGTGGAGGTCGGgt............................................................ | 27 | gt | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .......................................................................................................................................GAGAGCCTGACTGCAGCATCCAAGGA............................................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................AGACTACCAGCATTGACATGTGGgc......................................................................................................................................................................................................................................................................................................................... | 25 | gc | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................TGGTAGAGAGCCTGACTGCAGCATCC.................................................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................TTGGCACTGCAGACCTTGTGGGAGAGCCT........................................................................................................................ | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................................TGTTGATTCGTTGCTAAGTGGAGGT................................................................. | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............TTGGAACTACCACCCAGACTACCAGCA...................................................................................................................................................................................................................................................................................................................................... | 27 | 2 | 1.00 | 1.00 | - | - | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................TGCAGACCTTGTGGGAGAGCCTTATGGCC................................................................................................................. | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................................TGTTGATTCGTTGCTAAGTGGAGG.................................................................. | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................TGATTCGTTGCTAAGTGGAGGTCGt.............................................................. | 25 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................................TTGATTCGTTGCTAAGTGGAGGTCGG.............................................................. | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................TTCACGTGTGTGTTGATTCGTTGCT........................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......TGCTGCTTGGAACTACCACCCAGAa.............................................................................................................................................................................................................................................................................................................................................. | 25 | a | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................TGACTGCAGCATCCAAGGAG............................................................................................................................................................................................................ | 20 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................GTGGTAGAGAGCCgc.............................................................................................................................................................................................................................. | 15 | gc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................CTTGGCACTGCAGACCTTGTGGGAGA............................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................TTCACGTGTGTGTTGATTCGTTGCTAAGTGt..................................................................... | 31 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................TGATTCGTTGCTAAGTGGAGGTCGGCTt........................................................... | 28 | t | 1.00 | 2.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................................................TCCTGGCAGAGCTGCTGGCCCATAAGCCCC...... | 30 | 2 | 0.50 | 0.50 | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................................................TACAGGGCTGTCGGCTGCATCCTGGC............................. | 26 | 2 | 0.50 | 0.50 | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................................................................................GCTGTCGGCTGCATCCTGGCAGA.......................... | 23 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................................................TCCTGGCAGAGCTGCTGGCCCATAAGCC........ | 28 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................................................................................ACAGGGCTGTCGGCTGCATCCTGGC............................. | 25 | 2 | 0.50 | 0.50 | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................................AGGGCTGTCGGCTGCATCCTGG.............................. | 22 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - |
| ..................ACTACCACCCAGACTACCAGCATTGACATG.............................................................................................................................................................................................................................................................................................................................. | 30 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - |
| ............................................................................................................................TTGGTGTGGTAGAGAG.................................................................................................................................................................................................................................. | 16 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....AGCTGCTGCTTGGAACTACCACCCAGA............................................................................................................................................................................................................................................................................................................................................... | 27 | 2 | 0.50 | 0.50 | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....AGCTGCTGCTTGGAACTACCACCC.................................................................................................................................................................................................................................................................................................................................................. | 24 | 2 | 0.50 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................CTACCAGCATTGACATGT............................................................................................................................................................................................................................................................................................................................. | 18 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - |
| ...............GGAACTACCACCCAGACTACCAGC....................................................................................................................................................................................................................................................................................................................................... | 24 | 2 | 0.50 | 0.50 | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................TGGAGGTCAGCCCTGGTCAGGGGGAGC...................................................................................................................................................................................................................................................... | 27 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............TTGGAACTACCACCCAGACTACCAGCATT.................................................................................................................................................................................................................................................................................................................................... | 29 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................................CTGGCAGAGCTGCTGGCCCATAAGCCCC...... | 28 | 2 | 0.50 | 0.50 | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................ACTACCACCCAGACTACCAGCATTGACA................................................................................................................................................................................................................................................................................................................................ | 28 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........GCTTGGAACTACCACCCAGACTACCAGC....................................................................................................................................................................................................................................................................................................................................... | 28 | 2 | 0.50 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................................................TACAGGGCTGTCGGCTGCATCCTGG.............................. | 25 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................................................................................................GGCTGCATCCTGGCAGAGCTGCTGGCCC............... | 28 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 |
| CCAGAGCTGCTGCTTGGAACTACCACCCAGACTACCAGCATTGACATGTGGTAGGCGTGGTTTCTGCTCCCAGGGCCTCAAGTCTTCTGGCCCTGGAGGTCAGCCCTGGTCAGGGGGAGCAGGATTGGTGTGGTAGAGAGCCTGACTGCAGCATCCAAGGAGGGGGAGCACGAGAACATGGCTGGGGTGCTCACTGGCTCCGGCCTCAGGTTCTCACTTGGCACTGCAGACCTTGTGGGAGAGCCTTATGGCCATTTGCCTGCTTCTTCACGTGTGTGTTGATTCGTTGCTAAGTGGAGGTCGGCTGCTTCTACAGGGCTGTCGGCTGCATCCTGGCAGAGCTGCTGGCCCATAAGCCCCTCCTCC .........................................................................................................................................................................................................................((((((..(((.((..((((((..(((.....(((.....))).)))..)))))).)).)))........))))))((((((((.....)))))))).................................................... ........................................................................................................................................................................................................................217................................................................................................316................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | mjTestesWT3() Testes Data. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | SRR028731(GSM400968) Mili-wt-associated. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | mjTestesWT2() Testes Data. (testes) | mjTestesWT4() Testes Data. (testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR363958(GSM822760) Adult-WTSmall RNA Miwi IP. (testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR051939(GSM545783) Mov10L1-associated piRNAs. (mov10L testes) | GSM475281(GSM475281) total RNA. (testes) | SRR029040(GSM433292) 6w_hetero_tdrd6-KO. (tdrd6 testes) | SRR363957(GSM822759) P20-WTSmall RNA Miwi IPread_length: 36. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR028730(GSM400967) Tdrd1-associated. (tdrd1 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR363956(GSM822758) P14-WTSmall RNA Miwi IPread_length: 36. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ....................................................................................................................................................................................................GCTCCGGCCTCAGGTTCTCACTTGGCA............................................................................................................................................... | 27 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................................................................GCTAAGTGGAGGTCGGCTGCTTCTA..................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................AGGTTCTCACTTGtgaa.................................................................................................................................................. | 17 | tgaa | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................ACTGGCTCCGGCCTCAGGTTCTCAtt...................................................................................................................................................... | 26 | tt | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................................................................................GCTGCATCCTGGCAGAGCTGCTGGCCCA.............. | 28 | 2 | 1.00 | 1.00 | - | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................................................................................GCTGCATCCTGGCAGAGCTGCTGGCCCATA............ | 30 | 2 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................................................................................GCTGCTTCTACAGGGCTGTCGGCTGCA.................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................................AGGTCGGCTGCTTCTACAGGGCTGTCG.......................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................TGCTCCCAGGGCCTCagc............................................................................................................................................................................................................................................................................................... | 18 | agc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................AAGTCTTCTGGCCCTGGAGGTCAGCCCT................................................................................................................................................................................................................................................................... | 28 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - |