| Gene: Spg7 | ID: uc009nuc.1_intron_4_0_chr8_125600891_f.5p | SPECIES: mm9 |
|
|
(2) OTHER.mut |
(4) PIWI.ip |
(1) PIWI.mut |
(11) TESTES |
| AGCAAGGACAGGATTCCCGTGTCCTACAAGCGGACAGGATTCTTTGGGAAGTATGTTAGTTGTTCTGTGGACTTGACCTGACCCAGCTTGACGCTGCCCTCGCTGATGGTTGACTGTGTCCCCGGGGAAGTTTCTGACAGTGTGAGAGTGCAGGATGGCTGTGCAGGTTGCTGGAACTTTTGCTGTCTTTAGCTGTTGGTGGGAGTTCTTAACTAAGCACACTGGGGTTGCTGTTTTCTACAGAGGAAAA |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR037902(GSM510438) testes_rep3. (testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................GTATGTTAGTTGTTCTGTGGACTTGACCTGACCCAGCTTGACGCTGCCCTCG.................................................................................................................................................... | 52 | 1 | 74.00 | 74.00 | 74.00 | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................TAACTAAGCACACTGGttg...................... | 19 | ttg | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ........................TACAAGCGGACAGGATTCTTTGGGAg........................................................................................................................................................................................................ | 26 | g | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ......................................................................................................................................TGACAGTGTGAGAGTGCAGGATGGCTGT........................................................................................ | 28 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .....................TCCTACAAGCGGACcatc................................................................................................................................................................................................................... | 18 | catc | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..............................CGGACAGGATTCTTTGGG.......................................................................................................................................................................................................... | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ...................TGTCCTACAAGCGGACAGGATTCTTTG............................................................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .......................CTACAAGCGGACAGGATTCTTTGGGAA........................................................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ........................TACAAGCGGACAGGATTCTTTGGGA......................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - |
| AGCAAGGACAGGATTCCCGTGTCCTACAAGCGGACAGGATTCTTTGGGAAGTATGTTAGTTGTTCTGTGGACTTGACCTGACCCAGCTTGACGCTGCCCTCGCTGATGGTTGACTGTGTCCCCGGGGAAGTTTCTGACAGTGTGAGAGTGCAGGATGGCTGTGCAGGTTGCTGGAACTTTTGCTGTCTTTAGCTGTTGGTGGGAGTTCTTAACTAAGCACACTGGGGTTGCTGTTTTCTACAGAGGAAAA |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR037902(GSM510438) testes_rep3. (testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ......................................................................................................................................................................................................................................TTTCTACAGAGGAAAttaa. | 19 | ttaa | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................TGAGAGTGCAGGATgctt.............................................................................................. | 18 | gctt | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..............................................................................................................CTGTGTCCCCGGGGAagt.......................................................................................................................... | 18 | agt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - |