| Gene: Zcchc14 | ID: uc009nrx.1_intron_0_0_chr8_124126232_r.3p | SPECIES: mm9 |
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(1) OTHER.mut |
(5) PIWI.ip |
(2) PIWI.mut |
(19) TESTES |
| TGGTGCTCTGTCGGTCACTTCCCCCAGAAGGTCTCGTACCCGTGGCATGCGGCTGTGCGAGGGCGTGGTCAGTCCTGAGTGGCATCTCAGAGCAGGTGGGCGGTGTGTGCACTTTTGTGATTGACTCAGGCTTCACCCTCTTCTCTCTCTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGTTCTCTCCAGGAACTTTTAGGTTGAAATACGCCCCTCCAGCAGAAAGTCTGGACTCCACG ..................................................(((..(((....)))..))).((.(((((......))))).)).((((.((.....)).))))......................................................................................................................................... ..................................................51.............................................................114...................................................................................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | mjTestesWT4() Testes Data. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT1() Testes Data. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR037901(GSM510437) testes_rep2. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..........................................TGGCATGCGGCTGTGCGAGGGCGTG....................................................................................................................................................................................... | 25 | 1 | 16.00 | 16.00 | 6.00 | 4.00 | 2.00 | - | - | - | - | 1.00 | 1.00 | - | - | 1.00 | 1.00 | - | - | - | - | - | - |
| ..........................................TGGCATGCGGCTGTGCGAGGGCGTGa...................................................................................................................................................................................... | 26 | a | 8.00 | 16.00 | - | - | - | - | - | 8.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................TGGCATGCGGCTGTGCGAGGGCGTGG...................................................................................................................................................................................... | 26 | 1 | 7.00 | 7.00 | 4.00 | 2.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..........................................TGGCATGCGGCTGTGCGAGGGCGTGGT..................................................................................................................................................................................... | 27 | 1 | 5.00 | 5.00 | 1.00 | 3.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................TCTCAGAGCAGGTGGGCGGTGTGTGC............................................................................................................................................ | 26 | 1 | 3.00 | 3.00 | - | - | - | - | - | - | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .....................................................................................................................TGATTGACTCAGGCTTCACCCTCTTC........................................................................................................... | 26 | 1 | 3.00 | 3.00 | - | - | - | - | 1.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................TGGCATGCGGCTGTGCGAGGGggtg....................................................................................................................................................................................... | 25 | ggtg | 2.00 | 0.00 | - | - | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................TGAGTGGCATCTCAGAGCAGGTGGGCGG................................................................................................................................................... | 28 | 1 | 2.00 | 2.00 | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................GAAGGTCTCGTACCCGTGGCATGCGGCT.................................................................................................................................................................................................... | 28 | 1 | 2.00 | 2.00 | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................TCTCCAGGAACTTTTAGGTTGAAATACGC............................ | 29 | 1 | 2.00 | 2.00 | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................TGGCATGCGGCTGTGCGAGGGCGTGGTC.................................................................................................................................................................................... | 28 | 1 | 2.00 | 2.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................TGGCATGCGGCTGTGCGAGGGCGTGaa..................................................................................................................................................................................... | 27 | aa | 2.00 | 16.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................TGTGATTGACTCAGGCTTCACCCTCTTC........................................................................................................... | 28 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..........................................TGGCATGCGGCTGTGCGAGGGCGTGt...................................................................................................................................................................................... | 26 | t | 2.00 | 16.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................TTTAGGTTGAAATACGCCCCTCCAGC................... | 26 | 1 | 2.00 | 2.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................TTTTAGGTTGAAATACGCCCCTCCAG.................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .......................................................TGCGAGGGCGTGGTCAGTCCTGA............................................................................................................................................................................ | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................TGCACTTTTGTGATTGACTCAGGCTTC.................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................AAAGTCTGGACTCCAC. | 16 | 2 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ......TCTGTCGGTCACTTCCCCCAGAAGGTC......................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................TGGCATGCGGCTGTGCGAGGGCGTGGg..................................................................................................................................................................................... | 27 | g | 1.00 | 7.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................TTTTGTGATTGACTCAGGCTTCACCCT............................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................TCTCCAGGAACTTTTAGGTTGAAATACGCC........................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................TACGCCCCTCCAGCAGAAAGTCTGGACTCC... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .......................................................TGCGAGGGCGTGGTCAGTCa............................................................................................................................................................................... | 20 | a | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................TGGCATCTCAGAGCAGGTGGGCGGTGT................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................GAAGGTCTCGTACCCGTGGCATGCGGC..................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................TGGCATCTCAGAGCAGGTGGGCGGggt................................................................................................................................................ | 27 | ggt | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................GGCATGCGGCTGTGCGAGGGCGTGGT..................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................TCTCAGAGCAGGTGGGCGGTGTGTGCACT......................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................TCCTGAGTGGCATCTCAGAGCAGGT......................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .....CTCTGTCGGTCACTTCCCCCAGAAGGa.......................................................................................................................................................................................................................... | 27 | a | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................GGCATGCGGCTGTGCGAGGGCGTGG...................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................TGCGAGGGCGTGGTCAGTCCTGAGTGG........................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ...............................................TGCGGCTGTGCGAGGGCGTGGTCAGT................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................TGAGTGGCATCTCAGAGCAGGTGGGCGGT.................................................................................................................................................. | 29 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................TTGACTCAGGCTTCACCCTCTTCTC......................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ........TGTCGGTCACTTCCCCCAGAAGGTCTCGT..................................................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..........................GAAGGTCTCGTACCCGTGGCATG......................................................................................................................................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................TTGACTCAGGCTTCACCCTCTTCTCTC....................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................TGCGGCTGTGCGAGGGCGTGGTCAGTC................................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................TAGGTTGAAATACGCCCCTCCAGCAG................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ..............................................................................................GGTGGGCGGTGTGacca........................................................................................................................................... | 17 | acca | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................TGGCATCTCAGAGCAGGTGGGCGG................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .GGTGCTCTGTCGGTCACTTCC.................................................................................................................................................................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ...............................................................................TGGCATCTCAGAGCAGGTGGGCGGTG................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................AGTCCTGAGTGGCATCTCAGAGCAGG.......................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................TGGCATGCGGCTGTGCGAGGGCGTGGa..................................................................................................................................................................................... | 27 | a | 1.00 | 7.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................TCCAGGAACTTTTAGGTTGAAATACGCC........................... | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................TCAGAGCAGGTGGGCGGTGTGTGa............................................................................................................................................ | 24 | a | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................TTTTAGGTTGAAATACGCCCCTCCAGC................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................AGTGGCATCTCAGAGCAGGTGGGCGG................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................TGTGCACTTTTGTGATTGACTCAGGCTTC.................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................TCCAGGAACTTTTAGGTTGAAATACGC............................ | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................TTGTGATTGACTCAGGCTTCACCCTCTT............................................................................................................ | 28 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................GGCATCTCAGAGCAGGTGGGCGGT.................................................................................................................................................. | 24 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................CTCTCCAGGAACTTTTAGGTTGAAATACGC............................ | 30 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................GTGGCATCTCAGAGCAGGTGGGCGGTG................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........GTCGGTCACTTCCCCCAGAAGGTCTCG...................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................TTGTGATTGACTCAGGCTTCACC................................................................................................................. | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................TGAGTGGCATCTCAGAGCAGGTGGGCGt................................................................................................................................................... | 28 | t | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................TGATTGACTCAGGCTTCACCCTCTTCTC......................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................TGGCATGCGGCTGTGCGAGGGCGTGGga.................................................................................................................................................................................... | 28 | ga | 1.00 | 7.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................TGCGAGGGCGTGGTCAGTCCTGAGT.......................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................GGCATGCGGCTGTGCGAGGGCGTGa...................................................................................................................................................................................... | 25 | a | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................TGAAATACGCCCCTCCAGCAGAAAGTC........... | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................TGGCATGCGGCTGTGCGAGGGCGTGGTg.................................................................................................................................................................................... | 28 | g | 1.00 | 5.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................TCTCTCGTTCTCTCCAGGAACTTTTAGG....................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................TTCTCTCTCTCTCTCTCTCTCTCTCggt...................................................................... | 28 | ggt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .......................................................................................................TGTGTGCACTTTTGTGATTGACTCAGGC....................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................TGGCATCTCAGAGCAGGTGGGCGGgg................................................................................................................................................. | 26 | gg | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................TGGCATGCGGCTGTGCGAGGGCGTa....................................................................................................................................................................................... | 25 | a | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................TGGCATCTCAGAGCAGGTGGGCGGT.................................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................TTGACTCAGGCTTCACCCTCTTCTCT........................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................TCTCTCTCGTTCTCTCCA................................................... | 18 | 5 | 0.20 | 0.20 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.20 |
| TGGTGCTCTGTCGGTCACTTCCCCCAGAAGGTCTCGTACCCGTGGCATGCGGCTGTGCGAGGGCGTGGTCAGTCCTGAGTGGCATCTCAGAGCAGGTGGGCGGTGTGTGCACTTTTGTGATTGACTCAGGCTTCACCCTCTTCTCTCTCTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGTTCTCTCCAGGAACTTTTAGGTTGAAATACGCCCCTCCAGCAGAAAGTCTGGACTCCACG ..................................................(((..(((....)))..))).((.(((((......))))).)).((((.((.....)).))))......................................................................................................................................... ..................................................51.............................................................114...................................................................................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | mjTestesWT4() Testes Data. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT1() Testes Data. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR037901(GSM510437) testes_rep2. (testes) |
|---|