| Gene: Gse1 | ID: uc009nqz.1_intron_11_0_chr8_123098179_f.3p | SPECIES: mm9 |
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(3) OTHER.mut |
(3) PIWI.ip |
(12) TESTES |
| ACCTGTCCCCTGGGAACTTGTTCAGGGTTGGACTTGCTGCTAAACAGGCCACTCCTCCAACTCTTAACCTCGTGCACAGTGTTAACATGGGGTACACACACTGGGTCTTTCTGCACTTGTAAGCTCTGGAGATGTGTAGTATTTGCATGCCTGCCTGTTCCACAACTCATAATGTCCCCCTCATTTTCTGTCTCTCCAAGAACCAGCCACACAGCCAGCTCCTCTAGAGACGGATCAGCCTGTCGGGGTC |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR051941(GSM545785) 18-32 nt total small RNAs (Mov10l-/-). (mov10L testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR363956(GSM822758) P14-WTSmall RNA Miwi IPread_length: 36. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...............................................................................................................TGCACTTGTAAGCTCTGGAGATGTGT................................................................................................................. | 26 | 1 | 4.00 | 4.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................TGCACTTGTAAGCTCTGGAGATGTGTA................................................................................................................ | 27 | 1 | 2.00 | 2.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - |
| ............................................................................................................TTCTGCACTTGTAAGCTCTGGAGATG.................................................................................................................... | 26 | 1 | 2.00 | 2.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................TTGTAAGCTCTGGAGATGTGTAGT.............................................................................................................. | 24 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................TGTAAGCTCTGGAGATGTGTAGTAT............................................................................................................ | 25 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................TGTAAGCTCTGGAGATGTGTAGTA............................................................................................................. | 24 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................TGTAAGCTCTGGAGATGTGTAGT.............................................................................................................. | 23 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................CTTGTAAGCTCTGGAGATGTGTAGTA............................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................AGCCTGTCGGGGTCcaaa | 18 | caaa | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .............................................................................................................TCTGCACTTGTAAGCTCTGGAGATGT................................................................................................................... | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................TTTCTGCACTTGTAAGCTCTGGAGATGTGT................................................................................................................. | 30 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................TTTCTGCACTTGTAAGCTCTGGAGATG.................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................AGCTCTGGAGATGTGTAGTATTTG......................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ............GGAACTTGTTCAGGGTTGGACTTGCT.................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ...............................................................................................................................................................................................................................CTAGAGACGGATCAGCCTGTCGGGGTC | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ................................................................................................................................................................................................................................TAGAGACGGATCAGCCTGT....... | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ...............................................................................................................TGCACTTGTAAGCTCTGGAGATGTGTAG............................................................................................................... | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................CTAGAGACGGATCAGCCTGTCGGGG.. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ACCTGTCCCCTGGGAACTTGTTCAGGGTTGGACTTGCTGCTAAACAGGCCACTCCTCCAACTCTTAACCTCGTGCACAGTGTTAACATGGGGTACACACACTGGGTCTTTCTGCACTTGTAAGCTCTGGAGATGTGTAGTATTTGCATGCCTGCCTGTTCCACAACTCATAATGTCCCCCTCATTTTCTGTCTCTCCAAGAACCAGCCACACAGCCAGCTCCTCTAGAGACGGATCAGCCTGTCGGGGTC |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR051941(GSM545785) 18-32 nt total small RNAs (Mov10l-/-). (mov10L testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR363956(GSM822758) P14-WTSmall RNA Miwi IPread_length: 36. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ................................................................................................................................................GCATGCCTGCCTGTTCCACAACTCATA............................................................................... | 27 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................TGCCTGTTCCACAACTCATAATGTCCCCa....................................................................... | 29 | a | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ............................................................................................................................................................................TGTCCCCCTCATTTTCTGTCTCTCCAA................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .............ACTTGTTCAGGGTTGGACTTGCTGCTAgt................................................................................................................................................................................................................ | 29 | gt | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |