| Gene: Zdhhc7 | ID: uc009nqr.1_intron_2_0_chr8_122608826_r | SPECIES: mm9 |
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(4) OTHER.mut |
(5) PIWI.ip |
(18) TESTES |
| TGAACAACTGCGTCGGGGAGAAGAATCAGAGGTTCTTCGTGCTTTTCACCGTGAGTGCATGCGCTTCTTGGAGACTGCGCTGAACTGGAGGTTCTGAGAATTGAACCTGCTGGAGTTGGGGGACGTATTTAACCACAGCTAATGCCTGTGCTGGCACATGCAGAGCACAGTCCAGGGCGACCATGCCACTTGTATTACATCACCTGTTGGCTGTACGTTTGCCTGTCCCTCTGTCACCATTGTCATACACAGGGCCTCCCTCACACAGAGCTCATTTCCCCTCTACTTATTTGCCAGGTGGCTGTTGGGCTTGCTCCACTGGGGTCTGATCAGCTGCTGCTGCTACCTATAGTTCACTCCTCCAGCCAGCTCTGCCTGTTGGGGGTGGGAGGTGTGTGTGAGCTCCGCCAGCCTCTGCTTCTAGGCTGACAGCTTGTTGGGAACGACTAACCCGTCTCCCTCCTTCTAGATGTACATAGCTCTGTCTTCGGTTCATGCTCTGATTCTCTGTGGGCTTCA ............................................................................................................................................................................................................................................................................................................................................................................................(((((.((((((((.((..(((((....((((((........))))))..)))))((((....))))..)).)))))))).)))))..................................................... .................................................................................................................................................................................................................................................................................................................................................................................370................................................................................................469................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | mjTestesWT3() Testes Data. (testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..............................................................................................TGAGAATTGAACCTGCTGGAGTTGG................................................................................................................................................................................................................................................................................................................................................................................................................ | 25 | 1 | 4.00 | 4.00 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ..............................................................................................TGAGAATTGAACCTGCTGGAGTTGGG............................................................................................................................................................................................................................................................................................................................................................................................................... | 26 | 1 | 3.00 | 3.00 | - | - | - | - | - | 2.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................................................................................................................................TGCCTGTTGGGGGTGGGAGGTGTGT.......................................................................................................................... | 25 | 1 | 2.00 | 2.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGATGTACATAGCTCTGTCTTCGGTTC......................... | 28 | 1 | 2.00 | 2.00 | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................TACTTATTTGCCAGGTGGCTGTTGGGC................................................................................................................................................................................................................. | 27 | 1 | 2.00 | 2.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........TGCGTCGGGGAGAAGAATCAGAGGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 25 | 1 | 2.00 | 2.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................TGGCACATGCAGAGCACAGTCCAGGGC..................................................................................................................................................................................................................................................................................................................................................... | 27 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................TTGGAGACTGCGCTGAACTGGAGG............................................................................................................................................................................................................................................................................................................................................................................................................................................ | 24 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................TTGGAGACTGCGCTGAACTGGAGGTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................TTGGAGACTGCGCTGAACTGGAGGTTC......................................................................................................................................................................................................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...ACAACTGCGTCGGGGAGAAGAATCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ............................................................................................TCTGAGAATTGAACCTGtg........................................................................................................................................................................................................................................................................................................................................................................................................................ | 19 | tg | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................................................................................................................................................................................TAGGCTGACAGCTTGTTGGGAACGACT....................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................................................................................................................................................TGACAGCTTGTTGGGAACGACTAACC................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................................................................................................................TGAGCTCCGCCAGCCaaga...................................................................................................... | 19 | aaga | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGTTCATGCTCTGATTCTCTGTG....... | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGCTCTGTCTTCGGTTCATGCTCTGAa............... | 28 | a | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................AGAATCAGAGGTTCTTCGTGCTTTTCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATGTACATAGCTCTGTCTTCGGTTC......................... | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................GGAGACTGCGCTGAACTGGAGGTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................TGAACTGGAGGTTCTGAGAATTGAACCTGC......................................................................................................................................................................................................................................................................................................................................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....AACTGCGTCGGGGAGAAGAATCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................TGGAGACTGCGCTGAACTGGAGG............................................................................................................................................................................................................................................................................................................................................................................................................................................ | 23 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| TGAACAACTGCGTCGGGGAGAAGAATCAGAGGTTCTTCGTGCTTTTCACCGTGAGTGCATGCGCTTCTTGGAGACTGCGCTGAACTGGAGGTTCTGAGAATTGAACCTGCTGGAGTTGGGGGACGTATTTAACCACAGCTAATGCCTGTGCTGGCACATGCAGAGCACAGTCCAGGGCGACCATGCCACTTGTATTACATCACCTGTTGGCTGTACGTTTGCCTGTCCCTCTGTCACCATTGTCATACACAGGGCCTCCCTCACACAGAGCTCATTTCCCCTCTACTTATTTGCCAGGTGGCTGTTGGGCTTGCTCCACTGGGGTCTGATCAGCTGCTGCTGCTACCTATAGTTCACTCCTCCAGCCAGCTCTGCCTGTTGGGGGTGGGAGGTGTGTGTGAGCTCCGCCAGCCTCTGCTTCTAGGCTGACAGCTTGTTGGGAACGACTAACCCGTCTCCCTCCTTCTAGATGTACATAGCTCTGTCTTCGGTTCATGCTCTGATTCTCTGTGGGCTTCA ............................................................................................................................................................................................................................................................................................................................................................................................(((((.((((((((.((..(((((....((((((........))))))..)))))((((....))))..)).)))))))).)))))..................................................... .................................................................................................................................................................................................................................................................................................................................................................................370................................................................................................469................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | mjTestesWT3() Testes Data. (testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTTCTAGATGTACATAGCTCTGTC................................. | 26 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTACATAGCTCTGTCTTCGGTTCA........................ | 27 | 1 | 2.00 | 2.00 | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTCTCCCTCCTTCTAGATGTACATA......................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .......................................................................................................................................................................................................................................................................................................................................................................................................GTGTGAGCTCCGCCAtggc............................................................................................................. | 19 | tggc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ................................................................................................................................................................................................................................................................................................................................................................................................................................TCTAGGCTGACAGCTctg..................................................................................... | 18 | ctg | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTTCGGTTCATGCTCTGATTCTCTG......... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................................CTGGGGTCTGATCAGCaaa......................................................................................................................................................................................... | 19 | aaa | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACTAACCCGTatc................................................................ | 15 | atc | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCGTCTCCCTCCTTCTAGATGTACA........................................... | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................CCACTTGTATTACtagg................................................................................................................................................................................................................................................................................................................................. | 17 | tagg | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |