| Gene: Usp10 | ID: uc009nqn.1_intron_3_0_chr8_122466039_f.3p | SPECIES: mm9 |
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(1) OTHER.ip |
(3) OTHER.mut |
(4) PIWI.ip |
(1) PIWI.mut |
(20) TESTES |
| TAAACTGAGAGGATAACTGTAAATGTTGATGTTCAAGACAACTGCCCCCCACCCCTGCACCCCAACTTAGTAACAAAGCGGTGCTAAGTGAAGGCTTTCGGAGGACACGCTCTTCTGAAGGACTCTCAGCACTTCAGAAACGCCGTGCATGGATTCTGACTGCAATGTTAATGTCTTCATTTGCTTCTTCACTCTTGCAGAGTTATTGGAGACTGTAACCCTAATACATAAGCCAGTGTCATTGCAACCC ....................................................................................................(((((...((..((((((((..((...))..))))))))..))...(((.((((..((((......))))..)))).....))).)))))............................................................ ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesWT3() Testes Data. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | mjTestesWT2() Testes Data. (testes) | SRR363958(GSM822760) Adult-WTSmall RNA Miwi IP. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR051939(GSM545783) Mov10L1-associated piRNAs. (mov10L testes) | SRR363956(GSM822758) P14-WTSmall RNA Miwi IPread_length: 36. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...................................................................................................................TGAAGGACTCTCAGCACTTCAGAAACGCC.......................................................................................................... | 29 | 1 | 12.00 | 12.00 | 5.00 | 4.00 | - | - | - | - | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................TGAAGGACTCTCAGCACTTCAGAAACGC........................................................................................................... | 28 | 1 | 9.00 | 9.00 | 3.00 | 1.00 | 2.00 | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .............................................................................................................................................................................................................TTGGAGACTGTAACCCTAATACATAAGCC................ | 29 | 1 | 3.00 | 3.00 | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................TTGGAGACTGTAACCCTAATACATAAGC................. | 28 | 1 | 3.00 | 3.00 | - | - | 1.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................TTGCAGAGTTATTGGAGACTGTAACCCT............................ | 28 | 1 | 3.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | 2.00 | - | 1.00 | - | - | - | - | - | - |
| ...................................................................TAGTAACAAAGCGGTGCTAAGTGAAGGC........................................................................................................................................................... | 28 | 1 | 2.00 | 2.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................TGGAGACTGTAACCCTAATACATAAGC................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .............TAACTGTAAATGTTGATGTTCAAGACAACTGCC............................................................................................................................................................................................................ | 33 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ....................................................................AGTAACAAAGCGGTGCTAAGTGAAGGC........................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................TCTGAAGGACTCTCAGCACTTCAGAAACGC........................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................TAGTAACAAAGCGGTGCTAAGTGAAG............................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................TGGAGACTGTAACCCTAATACATAAGCCAGTG............ | 32 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ...................................................................................................................TGAAGGACTCTCAGCACTTCAGAAACGCCGT........................................................................................................ | 31 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ...........................................................................AAGCGGTGCTAAGTGAAGGCTTTCGGA.................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................TTGGAGACTGTAACCCTAATACATAAGCaa............... | 30 | aa | 1.00 | 3.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................AGGACTCTCAGCACTTCAGAAACGCCG......................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................TTGGAGACTGTAACC.............................. | 15 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................AGGACTCTCAGCACTTCAGAAACGCCGT........................................................................................................ | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....TGAGAGGATAACTGTAAATGTTGATGTT......................................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................TATTGGAGACTGTAACCCTAATACATAAGCC................ | 31 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................AAGGACTCTCAGCACTTCAGAAACGCCG......................................................................................................... | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................TGAAGGACTCTCAGCACTTCAGAAACGCCt......................................................................................................... | 30 | t | 1.00 | 12.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................TCACTCTTGCAGAGTTATTGGAGACTGTA................................. | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................TGAAGGACTCTCAGCACTTCAGAAACGt........................................................................................................... | 28 | t | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| TAAACTGAGAGGATAACTGTAAATGTTGATGTTCAAGACAACTGCCCCCCACCCCTGCACCCCAACTTAGTAACAAAGCGGTGCTAAGTGAAGGCTTTCGGAGGACACGCTCTTCTGAAGGACTCTCAGCACTTCAGAAACGCCGTGCATGGATTCTGACTGCAATGTTAATGTCTTCATTTGCTTCTTCACTCTTGCAGAGTTATTGGAGACTGTAACCCTAATACATAAGCCAGTGTCATTGCAACCC ....................................................................................................(((((...((..((((((((..((...))..))))))))..))...(((.((((..((((......))))..)))).....))).)))))............................................................ ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesWT3() Testes Data. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | mjTestesWT2() Testes Data. (testes) | SRR363958(GSM822760) Adult-WTSmall RNA Miwi IP. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR051939(GSM545783) Mov10L1-associated piRNAs. (mov10L testes) | SRR363956(GSM822758) P14-WTSmall RNA Miwi IPread_length: 36. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..............................................................................................................................................GCATGGATTCTGACTtaga......................................................................................... | 19 | taga | 5.00 | 0.00 | - | - | - | - | - | - | - | - | 2.00 | - | 3.00 | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................GCATGGATTCTGACtaga.......................................................................................... | 18 | taga | 2.00 | 0.00 | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................GCATGGATTCTGACcgga.......................................................................................... | 18 | cgga | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................GCATGGATTCTGACTtag......................................................................................... | 18 | tag | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................CACCCCAACTTAGTAAC................................................................................................................................................................................ | 17 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 |