| Gene: Usp10 | ID: uc009nqn.1_intron_10_0_chr8_122477246_f.3p | SPECIES: mm9 |
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(7) OTHER.mut |
(3) PIWI.ip |
(1) PIWI.mut |
(23) TESTES |
| GCTACTAGACAGGTTTGTGACTGAGATGACGAGACAGGCTGGTGCCTACCCACTCCAGCCGTACCTCAGCCAGCTTGCTCAGATGGCTCAGTTGCAGGTGTCCATAGGGGTGGGGTGCAGGTGTGGCTAGGGCTAGGGAGCCCCACAGGGTGCAGCTGTAGCCAGGCAGGCAGCCTGTGACCCTGGCTACTCTGTCCCAGGTTGAGGTGAGCCGCAGAGTGACTCTGGAGAAGCTGCCCCCTGTCCTCGT ....................................................................................................(((....)))..(((.(((((.((((((((((...((....))((((((.(((..((((......))))))).)))))).)))))))))))))))))).................................................... ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | mjTestesWT1() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | mjTestesWT2() Testes Data. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | GSM509276(GSM509276) small RNA cloning by length. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................................................................................................................AGGGTGCAGCTGTAGCCAGGCAGG................................................................................ | 24 | 1 | 254.00 | 254.00 | 132.00 | 40.00 | 30.00 | 21.00 | 7.00 | 8.00 | 9.00 | - | 2.00 | 3.00 | - | - | - | - | - | - | 1.00 | 1.00 | - | - | - | - | - |
| ..................................................................................................................................................AGGGTGCAGCTGTAGCCAGGCAGa................................................................................ | 24 | a | 22.00 | 17.00 | 19.00 | - | 1.00 | - | - | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................AGGGTGCAGCTGTAGCCAGGCAG................................................................................. | 23 | 1 | 17.00 | 17.00 | - | 6.00 | 5.00 | 1.00 | - | 2.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | 1.00 | - | - |
| ..................................................................................................................................................AGGGTGCAGCTGTAGCCAGGCAGaag.............................................................................. | 26 | aag | 10.00 | 17.00 | - | 10.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................CAGGGTGCAGCTGTAGCCAGGCAGG................................................................................ | 25 | 1 | 7.00 | 7.00 | 7.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................AGGGTGCAGCTGTAGCCAGGCA.................................................................................. | 22 | 1 | 7.00 | 7.00 | 7.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................ACAGGGTGCAGCTGTAGCCAGGC................................................................................... | 23 | 1 | 5.00 | 5.00 | - | - | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................AGGGTGCAGCTGTAGCCAGGCAGGta.............................................................................. | 26 | ta | 5.00 | 254.00 | - | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................ACAGGGTGCAGCTGTAGCCAGG.................................................................................... | 22 | 1 | 4.00 | 4.00 | - | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | 1.00 | - | - | - |
| ..................................................................................................................................................AGGGTGCAGCTGTAGCCAGGCAGt................................................................................ | 24 | t | 4.00 | 17.00 | 1.00 | - | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................AGGGTGCAGCTGTAGCCAGGC................................................................................... | 21 | 1 | 3.00 | 3.00 | - | - | - | - | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................CAGGGTGCAGCTGTAGCCAGG.................................................................................... | 21 | 1 | 3.00 | 3.00 | - | - | - | 1.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................GAGTGACTCTGGAGAAGCTG.............. | 20 | 1 | 2.00 | 2.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................AGGGTGCAGCTGTAGCCAGGCAa................................................................................. | 23 | a | 2.00 | 7.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ................................................................................................................................................ACAGGGTGCAGCTGTAGCCAGGCAat................................................................................ | 26 | at | 2.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................ACAGGGTGCAGCTGTAGCCAGGa................................................................................... | 23 | a | 2.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................AGGGTGCAGCTGTAGCCAGGCAGGt............................................................................... | 25 | t | 2.00 | 254.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................CAGGGTGCAGCTGTAGCCAGGCAt................................................................................. | 24 | t | 2.00 | 0.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................AGGGTGCAGCTGTAGCCAGGCAtg................................................................................ | 24 | tg | 1.00 | 7.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................TGAGCCGCAGAGTGACTCTGGAGAAGCTGC............. | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| .........................................................................................................................................................................................................................AGTGACTCTGGAGAAGCTGCCCCCT........ | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................CCGCAGAGTGACTCTGGAGAAGCTGCC............ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ...............................................................................................................................................CACAGGGTGCAGCTGTAGCCAGGC................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................CAGCCTGTGACCCTGGCTACTCTGTCCCAGa................................................. | 31 | a | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................AGGGTGCAGCTGTAGCCAGGCAGGg............................................................................... | 25 | g | 1.00 | 254.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................GCCGCAGAGTGACTCTGGAGAAGCTGCC............ | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..................................................................................................................................................AGGGTGCAGCTGTAGCCAGGCAGGaa.............................................................................. | 26 | aa | 1.00 | 254.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................ACAGGGTGCAGCTGTAGCCAGGCAa................................................................................. | 25 | a | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................GGGTGCAGCTGTAGCCAGGCAGG................................................................................ | 23 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................TGGCTACTCTGTCCCAGata............................................... | 20 | ata | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................AGGGTGCAGCTGTAGCCAGGCAGaa............................................................................... | 25 | aa | 1.00 | 17.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................AGGGTGCAGCTGTAGCCAGG.................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| GCTACTAGACAGGTTTGTGACTGAGATGACGAGACAGGCTGGTGCCTACCCACTCCAGCCGTACCTCAGCCAGCTTGCTCAGATGGCTCAGTTGCAGGTGTCCATAGGGGTGGGGTGCAGGTGTGGCTAGGGCTAGGGAGCCCCACAGGGTGCAGCTGTAGCCAGGCAGGCAGCCTGTGACCCTGGCTACTCTGTCCCAGGTTGAGGTGAGCCGCAGAGTGACTCTGGAGAAGCTGCCCCCTGTCCTCGT ....................................................................................................(((....)))..(((.(((((.((((((((((...((....))((((((.(((..((((......))))))).)))))).)))))))))))))))))).................................................... ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | mjTestesWT1() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | mjTestesWT2() Testes Data. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | GSM509276(GSM509276) small RNA cloning by length. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .......................GACGAGACAGGCTGctcc................................................................................................................................................................................................................. | 18 | ctcc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |