| Gene: Kars | ID: uc009nng.1_intron_13_0_chr8_114532287_r.3p | SPECIES: mm9 |
|
|
|
(4) OTHER.mut |
(4) PIWI.ip |
(1) PIWI.mut |
(18) TESTES |
| GGGTTTCGAATCCCAGATATGAAACGTTTTGTTTTTTTCTATGACAGGACTAAGAACATTGCAGATGTTAGTCAGGAGGGACTGAAGTTCAGAGGGACATTGCACGTTAGTACAAATCATGGCTCCCCTCCCCAGGAGTGCGGGAGGAGCGGGTGTATGCTATTGGTCCCCTCTGACTACACGTCTCTGTTTCCTGCTAGGTGGTGGTAATCAGTAGTTCCAGGGTGTTCCGCCATGTTGATGCAAGCTG ..................................................((..(((..(((((...((((((......)))))).((((....)))).))))).)))..)).......................................................................................................................................... ..................................................51.............................................................114...................................................................................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM179088(GSM179088) Developmentally regulated piRNA clusters implicate MILI in transposon control. (piwi testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................TAAGAACATTGCAGATGTTAGTCAGG.............................................................................................................................................................................. | 26 | 1 | 11.00 | 11.00 | 1.00 | 1.00 | 1.00 | - | 2.00 | 2.00 | 1.00 | - | - | - | 1.00 | - | - | - | 1.00 | - | - | 1.00 |
| ....................................................................................AAGTTCAGAGGGACATTGCACGTggt............................................................................................................................................ | 26 | ggt | 4.00 | 0.00 | 1.00 | - | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................TAAGAACATTGCAGATGTTAGTCAGGAG............................................................................................................................................................................ | 28 | 1 | 4.00 | 4.00 | 2.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................TGAAGTTCAGAGGGACATTGCACGTgt............................................................................................................................................. | 27 | gt | 3.00 | 0.00 | 1.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................TAGTTCCAGGGTGTTCCGCCATGTT........... | 25 | 1 | 3.00 | 3.00 | - | 1.00 | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................TGGTAATCAGTAGTTCCAGGGTGTTC.................... | 26 | 1 | 3.00 | 3.00 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..................................................TAAGAACATTGCAGATGTTAGTCAGGAtt........................................................................................................................................................................... | 29 | tt | 2.00 | 2.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................TAATCAGTAGTTCCAGGGTGTTCCGCCAT.............. | 29 | 1 | 2.00 | 2.00 | - | - | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................ATCAGTAGTTCCAGGGTGTTCCGCCAc.............. | 27 | c | 2.00 | 0.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................GAACATTGCAGATGTTAGTCAGGAGG........................................................................................................................................................................... | 26 | 1 | 2.00 | 2.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................TAGTCAGGAGGGACTGAAGTTCAGAGG........................................................................................................................................................... | 27 | 1 | 2.00 | 2.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................GAACATTGCAGATGTTAGTCAGGAGGG.......................................................................................................................................................................... | 27 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................TGAAGTTCAGAGGGACATTGCACGTggt............................................................................................................................................ | 28 | ggt | 2.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..................................................TAAGAACATTGCAGATGTTAGTCAGGAGt........................................................................................................................................................................... | 29 | t | 2.00 | 4.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................TAAGAACATTGCAGATGTTAGTCAGGA............................................................................................................................................................................. | 27 | 1 | 2.00 | 2.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................TAAGAACATTGCAGATGTTAGTCAG............................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................GTTCAGAGGGACATTGCACGTggtg........................................................................................................................................... | 25 | ggtg | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................TTGCAGATGTTAGTCAGGAGGGACTGA..................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................TCAGTAGTTCCAGGGTGTTCCGCCATG............. | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................GTGGTAATCAGTAGTTCCAGGGTGTT..................... | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................GTCCCCTCTGACTACACGTCTC............................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ..................................................................................TGAAGTTCAGAGGGACATTGCACGTg.............................................................................................................................................. | 26 | g | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .....................................................................................AGTTCAGAGGGACATTGCACGTggt............................................................................................................................................ | 25 | ggt | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................TAGTTCCAGGGTGTTCCGCCATGTTa.......... | 26 | a | 1.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................TAATCAGTAGTTCCAGGGTGTTCCGCC................ | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................TGTTAGTCAGGAGGGACTGAAGTTCA............................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ...........................................................TGCAGATGTTAGTCAGGAGGGACTGA..................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................ACATTGCAGATGTTAGTCAGGAGGGACTGAAGT.................................................................................................................................................................. | 33 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................TGTTAGTCAGGAGGGACTGAAGTTC................................................................................................................................................................ | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................TATGACAGGACTAAGAACATTGCAGATGT...................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................GGGTGTTCCGCCATGTTGATGCAAGCT. | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................TAAGAACATTGCAGATGTTAGTCAGGt............................................................................................................................................................................. | 27 | t | 1.00 | 11.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ....................................................................TAGTCAGGAGGGACTGAAGTTCAGA............................................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .............................................AGGACTAAGAACATT.............................................................................................................................................................................................. | 15 | 12 | 0.08 | 0.08 | - | - | - | - | - | - | 0.08 | - | - | - | - | - | - | - | - | - | - | - |
| GGGTTTCGAATCCCAGATATGAAACGTTTTGTTTTTTTCTATGACAGGACTAAGAACATTGCAGATGTTAGTCAGGAGGGACTGAAGTTCAGAGGGACATTGCACGTTAGTACAAATCATGGCTCCCCTCCCCAGGAGTGCGGGAGGAGCGGGTGTATGCTATTGGTCCCCTCTGACTACACGTCTCTGTTTCCTGCTAGGTGGTGGTAATCAGTAGTTCCAGGGTGTTCCGCCATGTTGATGCAAGCTG ..................................................((..(((..(((((...((((((......)))))).((((....)))).))))).)))..)).......................................................................................................................................... ..................................................51.............................................................114...................................................................................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM179088(GSM179088) Developmentally regulated piRNA clusters implicate MILI in transposon control. (piwi testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) |
|---|