| Gene: Bcar1 | ID: uc009nmt.1_intron_2_0_chr8_114238337_r.5p | SPECIES: mm9 |
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|
(1) OTHER.mut |
(3) PIWI.ip |
(1) PIWI.mut |
(11) TESTES |
| ACGTGCCCCCTAGTGTGGAGAAAGGCCTGCTCTCGTCCAGCCATCATTCGGTAAGGATCACTGATGCTGAGGGCAAGGCTGAGCGTGTGCACGGGGCTTGGGCTGCTGTCTGCAGACCCTGGCTCTGCCCTTACTTGCTCTAGGGACAGATGAATGCCCAGGCTGTAGAGATGGTTCCGTGGTCAAAGCACTGTTTGCTCTTCTTGAAGACCCAGGGTCAGTTCCCAGCATCCATACAGTGTCTGGCTAT |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT3() Testes Data. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................GTAAGGATCACTGATGCTGAGGGCA............................................................................................................................................................................... | 25 | 1 | 13.00 | 13.00 | 10.00 | 2.00 | - | 1.00 | - | - | - | - | - | - | - |
| ..................................................GTAAGGATCACTGATGCTGAGGGCAAG............................................................................................................................................................................. | 27 | 1 | 10.00 | 10.00 | 7.00 | 1.00 | - | 1.00 | - | 1.00 | - | - | - | - | - |
| ..................................................GTAAGGATCACTGATGCTGA.................................................................................................................................................................................... | 20 | 1 | 2.00 | 2.00 | - | - | 2.00 | - | - | - | - | - | - | - | - |
| ..................................................GTAAGGATCACTGATGCTGAGGGCAAGGCTGA........................................................................................................................................................................ | 32 | 1 | 2.00 | 2.00 | - | - | 2.00 | - | - | - | - | - | - | - | - |
| ..................................................GTAAGGATCACTGATGCTGAGGGC................................................................................................................................................................................ | 24 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .........................................................TCACTGATGCTGAGGGCAAGGCTGA........................................................................................................................................................................ | 25 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .....................................................................AGGGCAAGGCTGAGCGTGTG................................................................................................................................................................. | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .................................................................................................................................................ACAGATGAATGCCCAGGCTGTAGAGATGGTTCa........................................................................ | 33 | a | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ....................................................AAGGATCACTGATGCTGAGGGCAAGG............................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .........CTAGTGTGGAGAAAGGCCTGCTCTCGT...................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ............................................................................................................................................................CCCAGGCTGTAGAGATGGT........................................................................... | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ACGTGCCCCCTAGTGTGGAGAAAGGCCTGCTCTCGTCCAGCCATCATTCGGTAAGGATCACTGATGCTGAGGGCAAGGCTGAGCGTGTGCACGGGGCTTGGGCTGCTGTCTGCAGACCCTGGCTCTGCCCTTACTTGCTCTAGGGACAGATGAATGCCCAGGCTGTAGAGATGGTTCCGTGGTCAAAGCACTGTTTGCTCTTCTTGAAGACCCAGGGTCAGTTCCCAGCATCCATACAGTGTCTGGCTAT |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT3() Testes Data. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ......................................................................................................................................................................................................................CAGTTCCCAGCATCCActta................ | 20 | ctta | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ...................................................................................................................................................................................................................GGGTCAGTTCCCAGCATCCATAcgg.............. | 25 | cgg | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - |