| Gene: Ctrb1 | ID: uc009nms.1_intron_5_0_chr8_114213501_r.3p | SPECIES: mm9 |
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(1) OTHER.mut |
(2) PIWI.ip |
(6) TESTES |
| CTCAGTGGTCCAACTTGTTTTCTGTTCCTTCTCCTGTGACATGCCTGGCTGGGGGTAGCTGTGCCTCTCTTCATCCCTCGGGGAATAACTGGGGTCAGGAGGGTCTGTGTGTGGGGGGACCCAATGTTTCCAGGGGAGGTGGTATGGTCTCAGCGGGGTCCGGGTTGGCTGTGACAACATGACTACCACTGTCTCCCCAGGCTGTGGGGTCCCTGCCATCCAACCCGTGCTGACCGGTCTGTCCAGGATC ....................................................................................................(((........((((....)))).....))).(((((((..((.(((((....(((...))).((((.......))))..)))))..))..))))))).................................................... ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | mjTestesWT3() Testes Data. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) |
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| CTCAGTGGTCCAACTTGTTTTCTGTTCCTTCTCCTGTGACATGCCTGGCTGGGGGTAGCTGTGCCTCTCTTCATCCCTCGGGGAATAACTGGGGTCAGGAGGGTCTGTGTGTGGGGGGACCCAATGTTTCCAGGGGAGGTGGTATGGTCTCAGCGGGGTCCGGGTTGGCTGTGACAACATGACTACCACTGTCTCCCCAGGCTGTGGGGTCCCTGCCATCCAACCCGTGCTGACCGGTCTGTCCAGGATC ....................................................................................................(((........((((....)))).....))).(((((((..((.(((((....(((...))).((((.......))))..)))))..))..))))))).................................................... ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | mjTestesWT3() Testes Data. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) |
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| ...................GTTCCTTCTCCTGtcgg...................................................................................................................................................................................................................... | 17 | tcgg | 2.00 | 0.00 | 2.00 | - | - | - | - | - |
| ....................................................................................................................................................................................................................CTGCCATCCAACCCGTGCTGACCGGT............ | 26 | 1 | 2.00 | 2.00 | - | - | 1.00 | - | - | 1.00 |
| ........TCCAACTTGTTTTCTGTTCCTTCTCCT....................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - |
| ................GTTTTCTGTTCCTTCTCCTGTGACA................................................................................................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - |
| ...........................................................................................................................GTTTCCAGGGGAGGTGGgt............................................................................................................ | 19 | gt | 1.00 | 0.00 | - | - | - | - | 1.00 | - |
| ...............TGTTTTCTGTTCCTTCTCCTGTGACA................................................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - |