| Gene: Ddx19b | ID: uc009nlm.1_intron_7_0_chr8_113544622_r | SPECIES: mm9 |
|
|
(6) OTHER.mut |
(2) OVARY |
(4) PIWI.ip |
(1) PIWI.mut |
(25) TESTES |
| GACCCAAGCTCCCCGCTCTACTCAGTGAAGTCCTTCGAAGAGCTTCGCCTGTGAGTAGTGGCTTACTTACATTCAGACAGAGATCATGGCCTGGCTACACATTTTTCATACAGCATTATGTTTACCTACACAATAGGTACACACACACACACACACACATATAATAGGTTAATAATATGCATGTAGCTGCTTTGAGTGTTATGTAAAAACTTTAGTGGTTAGGTGTTCTCAGCTACATCCTGTGTGTTCTTCAGTCTCAGTGACTTTTATCTTTAATGCCTTTTCCAGGAAACCACAGCTTCTCCAGGGAGTCTATGCTATGGGTTTCAACCGCCCTT |
Size | Perfect hit | Total Norm | Perfect Norm | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR029040(GSM433292) 6w_hetero_tdrd6-KO. (tdrd6 testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | GSM475281(GSM475281) total RNA. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | GSM179088(GSM179088) Developmentally regulated piRNA clusters implicate MILI in transposon control. (piwi testes) | SRR037902(GSM510438) testes_rep3. (testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR042486(GSM539878) mouse ovaries [09-002]. (ovary) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014234(GSM319958) Ovary total. (ovary) | SRR363956(GSM822758) P14-WTSmall RNA Miwi IPread_length: 36. (testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR363958(GSM822760) Adult-WTSmall RNA Miwi IP. (testes) | SRR037903(GSM510439) testes_rep4. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................TACTCAGTGAAGTCCTTCGAAGAGCTTC.................................................................................................................................................................................................................................................................................................... | 28 | 2 | 51.50 | 51.50 | 12.50 | 11.50 | 9.00 | 6.00 | - | 4.00 | 2.50 | 1.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | 0.50 | - | - | - | - |
| ..................................................GTGAGTAGTGGCTTACTTACATTCAGACAGAGATCATGGCCTGGCTACACAT............................................................................................................................................................................................................................................ | 52 | 1 | 30.00 | 30.00 | - | - | - | - | 30.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................TACTCAGTGAAGTCCTTCGAAGAGCTTCGC.................................................................................................................................................................................................................................................................................................. | 30 | 2 | 27.50 | 27.50 | 3.50 | 7.50 | 6.50 | 3.00 | - | 3.50 | 3.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................TACTCAGTGAAGTCCTTCGAAGAGCTT..................................................................................................................................................................................................................................................................................................... | 27 | 2 | 12.50 | 12.50 | 3.00 | 1.50 | 1.50 | 3.50 | - | 1.00 | - | 1.50 | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................TACTCAGTGAAGTCCTTCGAAGAGCTTCGCC................................................................................................................................................................................................................................................................................................. | 31 | 2 | 12.00 | 12.00 | 1.00 | 3.00 | 2.00 | 2.00 | - | 1.00 | 1.00 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | 0.50 | - | - |
| ..................TACTCAGTGAAGTCCTTCGAAGAGCTTCGCt................................................................................................................................................................................................................................................................................................. | 31 | t | 8.50 | 27.50 | 1.00 | 1.50 | 1.50 | 2.50 | - | 1.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................TACTCAGTGAAGTCCTTCGAAGAGCTTCG................................................................................................................................................................................................................................................................................................... | 29 | 2 | 7.50 | 7.50 | 4.00 | 2.00 | 1.00 | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................TCCAGGGAGTCTATGCTATGGGTTTC.......... | 26 | 1 | 7.00 | 7.00 | 2.00 | - | - | 2.00 | - | - | 1.00 | - | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ................TCTACTCAGTGAAGTCCTTCGAAGAGCTTC.................................................................................................................................................................................................................................................................................................... | 30 | 2 | 5.50 | 5.50 | 1.50 | 1.50 | - | 1.00 | - | 1.00 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................TCTACTCAGTGAAGTCCTTCGAAGAGCTT..................................................................................................................................................................................................................................................................................................... | 29 | 2 | 5.00 | 5.00 | - | 1.50 | - | 0.50 | - | 1.00 | 0.50 | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | 0.50 |
| ................TCTACTCAGTGAAGTCCTTCGAAGA......................................................................................................................................................................................................................................................................................................... | 25 | 2 | 4.50 | 4.50 | - | 0.50 | 1.00 | 0.50 | - | - | - | 0.50 | - | 0.50 | 0.50 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................TGAAGTCCTTCGAAGAGCTTCGCCTG............................................................................................................................................................................................................................................................................................... | 26 | 2 | 3.50 | 3.50 | - | - | 1.00 | 0.50 | - | 1.00 | - | 0.50 | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - |
| .....................TCAGTGAAGTCCTTCGAAGAGCTTC.................................................................................................................................................................................................................................................................................................... | 25 | 2 | 2.50 | 2.50 | 1.50 | - | - | 0.50 | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................GTGAAGTCCTTCGAAGAGCTTCGCCTG............................................................................................................................................................................................................................................................................................... | 27 | 2 | 2.50 | 2.50 | 0.50 | - | - | - | - | - | - | 0.50 | - | 1.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................TACTCAGTGAAGTCCTTCGAAGAGCTTCGt.................................................................................................................................................................................................................................................................................................. | 30 | t | 2.50 | 7.50 | 1.00 | 1.00 | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................TCTACTCAGTGAAGTCCTTCGAAGAGC....................................................................................................................................................................................................................................................................................................... | 27 | 2 | 2.00 | 2.00 | - | 0.50 | - | - | - | - | - | 0.50 | - | - | 0.50 | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................TCCAGGGAGTCTATGCTATGGGTTTCAACCt..... | 31 | t | 2.00 | 1.00 | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................TCCAGGGAGTCTATGCTATGGGTTTCt......... | 27 | t | 2.00 | 7.00 | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................TCTACTCAGTGAAGTCCTTCGAAGAGCTTCt................................................................................................................................................................................................................................................................................................... | 31 | t | 2.00 | 5.50 | - | 0.50 | 0.50 | 0.50 | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................TTCTCCAGGGAGTCTATGCTATGGGTc............ | 27 | c | 2.00 | 1.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................................................................................CAGGGAGTCTATGCTATGGGTTTCAACC...... | 28 | 1 | 2.00 | 2.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................AAGTCCTTCGAAGAGCTTCGCCTGa.............................................................................................................................................................................................................................................................................................. | 25 | a | 2.00 | 0.00 | - | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................TCCAGGGAGTCTATGCTATGGGTT............ | 24 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................TCCAGGGAGTCTATGCTATGGGTTTCAACt...... | 30 | t | 2.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..................TACTCAGTGAAGTCCTTCGAAGAGCTccgc.................................................................................................................................................................................................................................................................................................. | 30 | ccgc | 1.50 | 1.00 | - | 0.50 | - | - | - | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................AGTGAAGTCCTTCGAAGAGCTTC.................................................................................................................................................................................................................................................................................................... | 23 | 2 | 1.50 | 1.50 | 0.50 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................TACTCAGTGAAGTCCTTCGAAGAGCTTCGCCT................................................................................................................................................................................................................................................................................................ | 32 | 2 | 1.50 | 1.50 | 0.50 | - | - | 0.50 | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................TACTCAGTGAAGTCCTTCGAAGcttc...................................................................................................................................................................................................................................................................................................... | 26 | cttc | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................TGAAGTCCTTCGAAGAGCTTCGCCTGT.............................................................................................................................................................................................................................................................................................. | 27 | 2 | 1.00 | 1.00 | - | 0.50 | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........CCCCGCTCTACTCAGTGAAGTCCTTgg............................................................................................................................................................................................................................................................................................................. | 27 | gg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................TACTCAGTGAAGTCCTTCGAAGAGCTTCGCtt................................................................................................................................................................................................................................................................................................ | 32 | tt | 1.00 | 27.50 | - | - | 0.50 | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................TTCTCCAGGGAGTCTATGCTATGGGTTTC.......... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................................................................AGCTTCTCCAGGGAGTCTATGCTAT................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................AGTCCTTCGAAGAGCTTCGCCTGaa............................................................................................................................................................................................................................................................................................. | 25 | aa | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................................................TCTATGCTATGGGTTTCAACCGCCCT. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................TACTCAGTGAAGTCCTTCGAAGAGCTTCtc.................................................................................................................................................................................................................................................................................................. | 30 | tc | 1.00 | 51.50 | 0.50 | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................................................GGGAGTCTATGCTATGGGTTTCAAC....... | 25 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................TACATTCAGACAGAGccc............................................................................................................................................................................................................................................................. | 18 | ccc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..................TACTCAGTGAAGTCCTTCGAAGAGt....................................................................................................................................................................................................................................................................................................... | 25 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................TTATGTAAAAACTTggag.......................................................................................................................... | 18 | ggag | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................TCCAGGGAGTCTATGCTATGGGTTTt.......... | 26 | t | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................GAAGTCCTTCGAAGAGCTTC.................................................................................................................................................................................................................................................................................................... | 20 | 2 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................TCCAGGGAGTCTATGCTATGGGTTTCAACC...... | 30 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................TCCAGGGAGTCTATGCTATGGGTTT........... | 25 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................TCTACTCAGTGAAGTCCTTCGAAGtgc....................................................................................................................................................................................................................................................................................................... | 27 | tgc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................................................................AGCTTCTCCAGGGAGTCTATGCTATGGGT............. | 29 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................ACTCAGTGAAGTCCTTCGAAGAGCTTC.................................................................................................................................................................................................................................................................................................... | 27 | 2 | 1.00 | 1.00 | 0.50 | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................TCCAGGGAGTCTATGCTATGGGTTTCAACCGt.... | 32 | t | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................AGGAAACCACAGCTTCggc................................. | 19 | ggc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................................................................................GGAGTCTATGCTATGGGTTTC.......... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................TTCTCCAGGGAGTCTATGCTATGGGT............. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................................................................AGCTTCTCCAGGGAGTCTATGCTATG................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................................CAGCTTCTCCAGGGAGTCTATGCTATG................ | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................................................................CTCCAGGGAGTCTATGCTATGGGc............. | 24 | c | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................TTCTCCAGGGAGTCTATGCTATGGGTTTCt......... | 30 | t | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................TTCGAAGAGCTTCGCCTGaaac........................................................................................................................................................................................................................................................................................... | 22 | aaac | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................CGAAGAGCTTCGCCTGa.............................................................................................................................................................................................................................................................................................. | 17 | a | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................................CAGCTTCTCCAGGGAGTCTATGCTAT................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................TCTCCAGGGAGTCTATGCTATGGGTTTC.......... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................TACTCAGTGAAGTCCTTCGAAGAGCT...................................................................................................................................................................................................................................................................................................... | 26 | 2 | 1.00 | 1.00 | 0.50 | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................AGTGAAGTCCTTCGAAGAGCTTCGC.................................................................................................................................................................................................................................................................................................. | 25 | 2 | 0.50 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........CCCCGCTCTACTCAGTGAAGTCCTTCGA............................................................................................................................................................................................................................................................................................................ | 28 | 2 | 0.50 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................TCTACTCAGTGAAGTCCTTCGAA........................................................................................................................................................................................................................................................................................................... | 23 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................TACTCAGTGAAGTCCTTCGAAGAGCTac.................................................................................................................................................................................................................................................................................................... | 28 | ac | 0.50 | 1.00 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................TGAAGTCCTTCGAAGAGCTTCGCC................................................................................................................................................................................................................................................................................................. | 24 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................TACTCAGTGAAGTCCTTCGAAGAGC....................................................................................................................................................................................................................................................................................................... | 25 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................TACTCAGTGAAGTCCTTCGAAGAGCTTCc................................................................................................................................................................................................................................................................................................... | 29 | c | 0.50 | 51.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................CTCAGTGAAGTCCTTCGAAGAGCTTCGC.................................................................................................................................................................................................................................................................................................. | 28 | 2 | 0.50 | 0.50 | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................TACTCAGTGAAGTCCTTCGAAGAGCTTCtcc................................................................................................................................................................................................................................................................................................. | 31 | tcc | 0.50 | 51.50 | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................TACTCAGTGAAGTCCTTCGAAGAGCTc..................................................................................................................................................................................................................................................................................................... | 27 | c | 0.50 | 1.00 | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................TGAAGTCCTTCGAAGAGCTTC.................................................................................................................................................................................................................................................................................................... | 21 | 2 | 0.50 | 0.50 | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................AGTGAAGTCCTTCGAAGAGCTTCtc.................................................................................................................................................................................................................................................................................................. | 25 | tc | 0.50 | 1.50 | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................TACTCAGTGAAGTCCTTCGAAGAGCTTCt................................................................................................................................................................................................................................................................................................... | 29 | t | 0.50 | 51.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........CCCGCTCTACTCAGTGAAGTCCTTCG............................................................................................................................................................................................................................................................................................................. | 26 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................TCAGTGAAGTCCTTCGAAGAGCTTCt................................................................................................................................................................................................................................................................................................... | 26 | t | 0.50 | 2.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................ACTCAGTGAAGTCCTTCGAAGAGC....................................................................................................................................................................................................................................................................................................... | 24 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - |
| .......................AGTGAAGTCCTTCGAAGAGCTTCGCCTGT.............................................................................................................................................................................................................................................................................................. | 29 | 2 | 0.50 | 0.50 | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................AGTCCTTCGAAGAGCTTCGCC................................................................................................................................................................................................................................................................................................. | 21 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - |
| .....................TCAGTGAAGTCCTTCGAAGAGCTT..................................................................................................................................................................................................................................................................................................... | 24 | 2 | 0.50 | 0.50 | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................GTCCTTCGAAGAGCTTCGC.................................................................................................................................................................................................................................................................................................. | 19 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................AGTGAAGTCCTTCGAAGAGCTTCGCCTGaaac........................................................................................................................................................................................................................................................................................... | 32 | aaac | 0.50 | 0.50 | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................TACTCAGTGAAGTCCTTCGAAGAGCTTCa................................................................................................................................................................................................................................................................................................... | 29 | a | 0.50 | 51.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................CAGTGAAGTCCTTCGAAGAGCTTCGCCTG............................................................................................................................................................................................................................................................................................... | 29 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................TCTACTCAGTGAAGTCCTTCGAAta......................................................................................................................................................................................................................................................................................................... | 25 | ta | 0.50 | 0.50 | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................TCTACTCAGTGAAGTCCTTCGAAGAG........................................................................................................................................................................................................................................................................................................ | 26 | 2 | 0.50 | 0.50 | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........TCCCCGCTCTACTCAGTGAAGTCC................................................................................................................................................................................................................................................................................................................. | 24 | 2 | 0.50 | 0.50 | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................ACTCAGTGAAGTCCTTCGAAGAGCTTCGC.................................................................................................................................................................................................................................................................................................. | 29 | 2 | 0.50 | 0.50 | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................AGTGAAGTCCTTCGAAGAGCTTCGCCTG............................................................................................................................................................................................................................................................................................... | 28 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................GTCCTTCGAAGAGCTTCGCCTG............................................................................................................................................................................................................................................................................................... | 22 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................TACTCAGTGAAGTCCTTCGAAGAGCTcc.................................................................................................................................................................................................................................................................................................... | 28 | cc | 0.50 | 1.00 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................TACTCAGTGAAGTCCTTCGAAGAGCTTCGtct................................................................................................................................................................................................................................................................................................ | 32 | tct | 0.50 | 7.50 | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................CAGTGAAGTCCTTCGAAGAGCTTC.................................................................................................................................................................................................................................................................................................... | 24 | 2 | 0.50 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................GAAGTCCTTCGAAGAGCTTCGC.................................................................................................................................................................................................................................................................................................. | 22 | 2 | 0.50 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................ACTCAGTGAAGTCCTTCGAAGAGCTT..................................................................................................................................................................................................................................................................................................... | 26 | 2 | 0.50 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................TACTCAGTGAAGTCCTTCGAAGA......................................................................................................................................................................................................................................................................................................... | 23 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................TACTCAGTGAAGTCCTTCGAAGAGCTTCGCCTt............................................................................................................................................................................................................................................................................................... | 33 | t | 0.50 | 1.50 | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................TCCTTCGAAGAGCTTCGCCT................................................................................................................................................................................................................................................................................................ | 20 | 2 | 0.50 | 0.50 | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................GAAGTCCTTCGAAGAGCTTCGCCTG............................................................................................................................................................................................................................................................................................... | 25 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................TACTCAGTGAAGTCCTTC.............................................................................................................................................................................................................................................................................................................. | 18 | 2 | 0.50 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................TGAAGTCCTTCGAAGAGCTTCGC.................................................................................................................................................................................................................................................................................................. | 23 | 2 | 0.50 | 0.50 | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................TACTCAGTGAAGTCCTTCGAAGAGCTTt.................................................................................................................................................................................................................................................................................................... | 28 | t | 0.50 | 12.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........CCCGCTCTACTCAGTGAAGTCC................................................................................................................................................................................................................................................................................................................. | 22 | 2 | 0.50 | 0.50 | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................TACTCAGTGAAGTCCTTCGAA........................................................................................................................................................................................................................................................................................................... | 21 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................TGAAGTCCTTCGAAGAGCTT..................................................................................................................................................................................................................................................................................................... | 20 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - |
| .....................TCAGTGAAGTCCTTCGAAGAGCTTCG................................................................................................................................................................................................................................................................................................... | 26 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................TGAAGTCCTTCGAAGAGCTTCGCCTGa.............................................................................................................................................................................................................................................................................................. | 27 | a | 0.50 | 3.50 | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................TACTCAGTGAAGTCCTTCGAAGAGCTTCGa.................................................................................................................................................................................................................................................................................................. | 30 | a | 0.50 | 7.50 | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................ACTCAGTGAAGTCCTTCGAAGAGCTTCGCCT................................................................................................................................................................................................................................................................................................ | 31 | 2 | 0.50 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................TCAGTGAAGTCCTTCGAAGAGCTTCGCCTG............................................................................................................................................................................................................................................................................................... | 30 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| GACCCAAGCTCCCCGCTCTACTCAGTGAAGTCCTTCGAAGAGCTTCGCCTGTGAGTAGTGGCTTACTTACATTCAGACAGAGATCATGGCCTGGCTACACATTTTTCATACAGCATTATGTTTACCTACACAATAGGTACACACACACACACACACACATATAATAGGTTAATAATATGCATGTAGCTGCTTTGAGTGTTATGTAAAAACTTTAGTGGTTAGGTGTTCTCAGCTACATCCTGTGTGTTCTTCAGTCTCAGTGACTTTTATCTTTAATGCCTTTTCCAGGAAACCACAGCTTCTCCAGGGAGTCTATGCTATGGGTTTCAACCGCCCTT |
Size | Perfect hit | Total Norm | Perfect Norm | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR029040(GSM433292) 6w_hetero_tdrd6-KO. (tdrd6 testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | GSM475281(GSM475281) total RNA. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | GSM179088(GSM179088) Developmentally regulated piRNA clusters implicate MILI in transposon control. (piwi testes) | SRR037902(GSM510438) testes_rep3. (testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR042486(GSM539878) mouse ovaries [09-002]. (ovary) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014234(GSM319958) Ovary total. (ovary) | SRR363956(GSM822758) P14-WTSmall RNA Miwi IPread_length: 36. (testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR363958(GSM822760) Adult-WTSmall RNA Miwi IP. (testes) | SRR037903(GSM510439) testes_rep4. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .........CCGCTCTACTCAGTGAAGTCCTTcga............................................................................................................................................................................................................................................................................................................... | 26 | cga | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ............CCGCTCTACTCAGTGAAGTCCTTCGAA........................................................................................................................................................................................................................................................................................................... | 27 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - |