| Gene: D8Ertd587e | ID: uc009nji.1_intron_1_0_chr8_112259264_r.3p | SPECIES: mm9 |
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(1) OTHER.mut |
(4) PIWI.ip |
(1) PIWI.mut |
(17) TESTES |
| TCATTAGCCCTGGATTGTTTTTTTTTTTTTTCCTTCAGTTTCCTGGGCACTCGGGTATACGTGCTGTTACCACTGGGTTGAGAATGAAGCAAGAACTTAGGGAGGTCAGTGGTTTTTGGTGGCTTTGGAATTGCCTTTCAGGATGGCCCGGGGAAGGTGAGAGCTCTGCCTCCAGCTGACATCAGCCTTGTGTCTTCTAGGCTCCCAAACCAGAGGGGAGGACACGTACTGCAGCTGCTCAGCCCCACCA ..........................................................................(((((......((((((((((((...((...))...)))))))....)))))....(((((((((.((.....))..))))))))).))))).................................................................................... .........................................................................74...........................................................................................167................................................................................. |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT3() Testes Data. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) |
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| ..............................................................................TGAGAATGAAGCAAGAACTTAGGGAGGc................................................................................................................................................ | 28 | c | 12.00 | 7.00 | 4.00 | - | 3.00 | 2.00 | - | - | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - |
| ..............................................................................TGAGAATGAAGCAAGAACTTAGGGAGG................................................................................................................................................. | 27 | 1 | 7.00 | 7.00 | 4.00 | 1.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................TACCACTGGGTTGAGAATGAAGCAAGAAC.......................................................................................................................................................... | 29 | 1 | 4.00 | 4.00 | - | 1.00 | - | - | 1.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - |
| ...................................................................TACCACTGGGTTGAGAATGAAGCAAGA............................................................................................................................................................ | 27 | 1 | 4.00 | 4.00 | - | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................TACGTGCTGTTACCACTGGGTTGAGA....................................................................................................................................................................... | 26 | 1 | 3.00 | 3.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 |
| .........................................................................TGGGTTGAGAATGAAGCAAGAACTTA....................................................................................................................................................... | 26 | 1 | 3.00 | 3.00 | - | 2.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................AACCAGAGGGGAGGACACGTACTGC.................. | 25 | 1 | 2.00 | 2.00 | - | - | - | - | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ...................................................................TACCACTGGGTTGAGAATGAAGCAAGAA........................................................................................................................................................... | 28 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - |
| ............................................................................GTTGAGAATGAAGCAAGAACTTAGGGA................................................................................................................................................... | 27 | 1 | 2.00 | 2.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................CACTGGGTTGAGAATGAAGCAAGA............................................................................................................................................................ | 24 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - |
| ...........................TTTTCCTTCAGTTTCCatga........................................................................................................................................................................................................... | 20 | atga | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .....................................................................CCACTGGGTTGAGAATGAAGCAAGAAC.......................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................TTTCCTGGGCACTCGGGTATACGTGC.......................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................AAACCAGAGGGGAGGACACGTACTGC.................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................TGAGAATGAAGCAAGAACTTAGGGAGGctcc............................................................................................................................................. | 31 | ctcc | 1.00 | 7.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .........................................................TACGTGCTGTTACCACTGGGTTGAGAAT..................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................CCCGGGGAAGGTGAGAG....................................................................................... | 17 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..............................................................................TGAGAATGAAGCAAGAACTTAGGGAG.................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................GTATACGTGCTGTTACCACTGGGTTGAGAA...................................................................................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................TGAGAATGAAGCAAGAACTTAGGGAGGct............................................................................................................................................... | 29 | ct | 1.00 | 7.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................TACCACTGGGTTGAGAATGAAGCAAG............................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................TACGTGCTGTTACCACTGGGTTGAGAA...................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................TGGGTTGAGAATGAAGCAAGAACTTAGt..................................................................................................................................................... | 28 | t | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................TGAAGCAAGAACTTAGGGAGGctc.............................................................................................................................................. | 24 | ctc | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................AATGAAGCAAGAACTTAGGGAGGctcc............................................................................................................................................. | 27 | ctcc | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................GAATGAAGCAAGAACTTAGGGAGGctc.............................................................................................................................................. | 27 | ctc | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................GAGGGGAGGACACGTACTGCAGCcgc............ | 26 | cgc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................AACCAGAGGGGAGGACACGTACTGCAG................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ......................................................................................................................................................................................................................GGGGAGGACACGTACTGCAGCTGCTCAG........ | 28 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| TCATTAGCCCTGGATTGTTTTTTTTTTTTTTCCTTCAGTTTCCTGGGCACTCGGGTATACGTGCTGTTACCACTGGGTTGAGAATGAAGCAAGAACTTAGGGAGGTCAGTGGTTTTTGGTGGCTTTGGAATTGCCTTTCAGGATGGCCCGGGGAAGGTGAGAGCTCTGCCTCCAGCTGACATCAGCCTTGTGTCTTCTAGGCTCCCAAACCAGAGGGGAGGACACGTACTGCAGCTGCTCAGCCCCACCA ..........................................................................(((((......((((((((((((...((...))...)))))))....)))))....(((((((((.((.....))..))))))))).))))).................................................................................... .........................................................................74...........................................................................................167................................................................................. |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT3() Testes Data. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) |
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