| Gene: Ccdc135 | ID: uc009mxs.1_intron_16_0_chr8_97601713_f | SPECIES: mm9 |
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(3) OTHER.mut |
(2) PIWI.ip |
(18) TESTES |
| TGTTCTCAGGCCATGTTCCGCATCCGAATCTTGGAACAGCGGCTCAATCGGTAAGGGGCAGAGCCGGGAGGACTCCTGGGAGCACTCTGATAGCTTGGATATCCCTCACCTTCTCCTCCCTCCCTCTGCTCAGGCACAAAGAGCTGGCTCCACTGAAGTACCTGGCGCTGGAGGAAAAGCTCT .......................................................((((((((..(((((((.....((((....(((((....)))))..))))........)))))))...)))))))).................................................... ..................................................51................................................................................133................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR363959(GSM822761) AdultSmall RNA Miwi IPread_length: 36. (testes) | mjTestesWT1() Testes Data. (testes) | SRR363960(GSM822762) Adult Library#1Small RNA Miwi IPDuplexed run:. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR363957(GSM822759) P20-WTSmall RNA Miwi IPread_length: 36. (testes) | SRR363956(GSM822758) P14-WTSmall RNA Miwi IPread_length: 36. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...............................................................CCGGGAGGACTCCTGGGAGCACTCTGATAGCTTGGATATCCCTCACCTTCTC.................................................................... | 52 | 1 | 21.00 | 21.00 | 21.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................TCCGAATCTTGGAACAGCGGCTCAATCGGc................................................................................................................................... | 30 | c | 7.00 | 6.00 | - | - | - | 3.00 | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | 1.00 | 1.00 | - |
| ......................TCCGAATCTTGGAACAGCGGCTCAATCGG.................................................................................................................................... | 29 | 1 | 6.00 | 6.00 | - | 4.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | 1.00 | - | - | - |
| .....................ATCCGAATCTTGGAACAGCGGCTCAATCGG.................................................................................................................................... | 30 | 1 | 6.00 | 6.00 | - | - | 6.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................TCCGAATCTTGGAACAGCGGCTCAATCGGctt................................................................................................................................. | 32 | ctt | 1.00 | 6.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................TCCGAATCTTGGAACAGCGGCTCAATCt..................................................................................................................................... | 28 | t | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................GTACCTGGCGCTaaac.......... | 16 | aaac | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ......................TCCGAATCTTGGAACAGCGGCTCAATCGGT................................................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................CCACTGAAGTACCTGGCGCTGGAGG......... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................ACCTGGCGCTGGAGGAAAAGCTC. | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ......................TCCGAATCTTGGAACAGCGGCTCAATC...................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................TCCGAATCTTGGAACAGCGGCTCAATCGt.................................................................................................................................... | 29 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ......................TCCGAATCTTGGAACAGCGGCTCAAacgg.................................................................................................................................... | 29 | acgg | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................ACCTGGCGCTGGAGGcttt..... | 19 | cttt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| TGTTCTCAGGCCATGTTCCGCATCCGAATCTTGGAACAGCGGCTCAATCGGTAAGGGGCAGAGCCGGGAGGACTCCTGGGAGCACTCTGATAGCTTGGATATCCCTCACCTTCTCCTCCCTCCCTCTGCTCAGGCACAAAGAGCTGGCTCCACTGAAGTACCTGGCGCTGGAGGAAAAGCTCT .......................................................((((((((..(((((((.....((((....(((((....)))))..))))........)))))))...)))))))).................................................... ..................................................51................................................................................133................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR363959(GSM822761) AdultSmall RNA Miwi IPread_length: 36. (testes) | mjTestesWT1() Testes Data. (testes) | SRR363960(GSM822762) Adult Library#1Small RNA Miwi IPDuplexed run:. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR363957(GSM822759) P20-WTSmall RNA Miwi IPread_length: 36. (testes) | SRR363956(GSM822758) P14-WTSmall RNA Miwi IPread_length: 36. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .........GCCATGTTCCGCATCCGAATCTTGGA.................................................................................................................................................... | 26 | 1 | 3.00 | 3.00 | - | - | - | - | - | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | 1.00 |
| ..................................AACAGCGGCTCAATCGGTAAGGGGCA........................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .GTTCTCAGGCCATGTTCCGCATCCGA............................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |