| Gene: Ciapin1 | ID: uc009mxa.1_intron_0_0_chr8_97347108_r | SPECIES: mm9 |
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(4) OTHER.mut |
(3) PIWI.ip |
(2) PIWI.mut |
(18) TESTES |
| GGGAGCAGTCCAAGGCGCAGAGCTCTCAGCCCAAGTCAGCCTGTGGAAATGTACGTACTGCACCTCCTGACACCCACCAACCCCTGACCCTAACTGCACACAGAGTAGCTGATCTTAAGGGATTTGTCACTGAGTGTTGTCATAGTGGGCCACGAGTGCAGCTGTAATGAGAAGAGGTTATCCCGAGAGGGAATCGGCATTCTCATGCCAGGCTGACAGTGGCTATCAGTTTTTATTTTGGCTGACCTTGCTGTGATCTCCTGTAGCAGAGGCTGCCTGAGCTACCTCTCCTCCGTCCCATGGGCTTCCACATAACTCAGGCAGGCCATAAACCTGCCTCAGCCTCCCAAGTACGTCAGTACAGCTGTGTTACCAACTCTCGTGGCTGGCGCCCGTACTGACTGACGTTTCATAGAACAAGAGACCCGTGGGTGTACGCAGGTGCCCTTTCCCTTTGGCCCTTAGCCTCTCTGTGTGACTGTTGTTTCTCCACAGTGCTACCTGGGTGACGCTTTCCGCTGTGCCAACTGCCCCTACCTCGGGAT ....................................................................................................................................................................................................................................................(((.(((.(((......((.((.(((((..((....))..))))).)).)).((((((((..((.......((.(((((((.......))))))).))..((......((((((((.(((..(((((((((.......))).)))))).....)))))))))))......))....))..))))))))..)))))))))...................................................................................................... ...................................................................................................................................................................................................................................................244....................................................................................................................................................................................................443.................................................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesWT3() Testes Data. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR051940(GSM545784) 18-32 nt total small RNAs (Mov10l+/-). (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ........................................................................................................................................................................................................................................................TGCTGTGATCTCCTGTAGCAGAGGCTGC............................................................................................................................................................................................................................................................................. | 28 | 1 | 8.00 | 8.00 | 5.00 | 1.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .......GTCCAAGGCGCAGAGCTCTCAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 23 | 1 | 2.00 | 2.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................TGGAAATGTACGTACTGCACCTCCTGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 27 | 1 | 2.00 | 2.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................TGTGATCTCCTGTAGCAGAGGCTGCCTG.......................................................................................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................TGTGATCTCCTGTAGCAGAGGCTGCC............................................................................................................................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ............................................................................................................................TGTCACTGAGTGTTGTCATAGTGGGCC.......................................................................................................................................................................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...........AAGGCGCAGAGCTCTCAGCCCAAGTCAGCCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 31 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCGCTGTGCCAACTGCCCCTACaa...... | 26 | aa | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...........AAGGCGCAGAGCTCTCAGCCCAAGTCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ................................................................................CCCCTGACCCTAACTttga.............................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 19 | ttga | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................................................................................................................TAGAACAAGAGACCCGTGGGTGTACGC.......................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCCGCTGTGCCAACTGCCCCTACC....... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................TGCAGCTGTAATGAGAAGAGGTTATCC.......................................................................................................................................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................TGCTGTGATCTCCTGTAGCAGAGGCTG.............................................................................................................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................TCCTGTAGCAGAGGCTGCCTGAGgta..................................................................................................................................................................................................................................................................... | 26 | gta | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................CGAGTGCAGCTGTAATGAGAAGAGGT............................................................................................................................................................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGCCTCTCTGTGTGACTGTTGTTTC......................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................................................................................................................TAGAACAAGAGACCCGTGGGTGTACG........................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ...................................................................................................................TAAGGGATTTGTCACTGAGTGTTGTC.................................................................................................................................................................................................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................TGCTGTGATCTCCTGTAGCAGAGGCTGCCT........................................................................................................................................................................................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGCTGTGCCAACTGCCCCTACCT...... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ...................................................................................................................TAAGGGATTTGTCACTGAGTGTTGTCAT.................................................................................................................................................................................................................................................................................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTACCTGGGTGACGCTTTCCGCTG........................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ...........................................................................................................................................................................................................................................................TGTGATCTCCTGTAGCAGAGGCTGCCT........................................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................GTCAGCCTGTGGAAATGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 18 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 |
| GGGAGCAGTCCAAGGCGCAGAGCTCTCAGCCCAAGTCAGCCTGTGGAAATGTACGTACTGCACCTCCTGACACCCACCAACCCCTGACCCTAACTGCACACAGAGTAGCTGATCTTAAGGGATTTGTCACTGAGTGTTGTCATAGTGGGCCACGAGTGCAGCTGTAATGAGAAGAGGTTATCCCGAGAGGGAATCGGCATTCTCATGCCAGGCTGACAGTGGCTATCAGTTTTTATTTTGGCTGACCTTGCTGTGATCTCCTGTAGCAGAGGCTGCCTGAGCTACCTCTCCTCCGTCCCATGGGCTTCCACATAACTCAGGCAGGCCATAAACCTGCCTCAGCCTCCCAAGTACGTCAGTACAGCTGTGTTACCAACTCTCGTGGCTGGCGCCCGTACTGACTGACGTTTCATAGAACAAGAGACCCGTGGGTGTACGCAGGTGCCCTTTCCCTTTGGCCCTTAGCCTCTCTGTGTGACTGTTGTTTCTCCACAGTGCTACCTGGGTGACGCTTTCCGCTGTGCCAACTGCCCCTACCTCGGGAT ....................................................................................................................................................................................................................................................(((.(((.(((......((.((.(((((..((....))..))))).)).)).((((((((..((.......((.(((((((.......))))))).))..((......((((((((.(((..(((((((((.......))).)))))).....)))))))))))......))....))..))))))))..)))))))))...................................................................................................... ...................................................................................................................................................................................................................................................244....................................................................................................................................................................................................443.................................................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesWT3() Testes Data. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR051940(GSM545784) 18-32 nt total small RNAs (Mov10l+/-). (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..........................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTCCCTTTGGCCCcgat.................................................................................... | 19 | cgat | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |