| Gene: Chd9 | ID: uc009msf.1_intron_37_0_chr8_93566870_f.5p | SPECIES: mm9 |
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(8) OTHER.mut |
(1) OVARY |
(2) PIWI.ip |
(1) PIWI.mut |
(18) TESTES |
| TGACTGGGGAGGAGCGCGTGCAGCTGATTAACAGAAGGAATGCGAGAAAGGTATGTGTGGGCTTGCTACGCTTCCACTGGCTATGCCGTTTACCTAGGCAGTGCTGTCTAACAAACTAGAGAGTGGGAAACCTTGCACAGCTGTGGGAAAAGGCGTGCATGATGATTTCATGTAGTCTGATACCAAATCCCACGTCGCTGACAGCGAGTGAGTGAGAGAAGCAGGGCTGCTATGTATGGCTGCACACTGC |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesKO7() Testes Data. (Zcchc11 testes) | GSM475281(GSM475281) total RNA. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR037898(GSM510434) ovary_rep3. (ovary) | SRR051941(GSM545785) 18-32 nt total small RNAs (Mov10l-/-). (mov10L testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) |
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| ..........................................................................................................................................................GTGCATGATGATTTCATGTAGTCTGATA.................................................................... | 28 | 1 | 13.00 | 13.00 | 1.00 | 1.00 | - | 2.00 | 1.00 | - | 1.00 | 1.00 | - | - | - | 1.00 | 1.00 | - | 1.00 | - | 1.00 | 1.00 | 1.00 |
| .........................................................................................................................................................CGTGCATGATGATTTCATGTAGTCTGATA.................................................................... | 29 | 1 | 8.00 | 8.00 | 2.00 | 1.00 | 2.00 | - | - | 2.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................CGTGCATGATGATTTCATGTAGTCTGA...................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ........................TGATTAACAGAAGGAATGCGAGAAAGGTt..................................................................................................................................................................................................... | 29 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................TCCCACGTCGCgacc................................................ | 15 | gacc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ........................TGATTAACAGAAGGAATGCGAGAAAG........................................................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................GTGCATGATGATTTCATGTAGTCTGA...................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................GTGCATGATGATTTCATGTAGTCTGATACaa................................................................. | 31 | aa | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................GCATGATGATTTCATGTAGTCTGATA.................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| TGACTGGGGAGGAGCGCGTGCAGCTGATTAACAGAAGGAATGCGAGAAAGGTATGTGTGGGCTTGCTACGCTTCCACTGGCTATGCCGTTTACCTAGGCAGTGCTGTCTAACAAACTAGAGAGTGGGAAACCTTGCACAGCTGTGGGAAAAGGCGTGCATGATGATTTCATGTAGTCTGATACCAAATCCCACGTCGCTGACAGCGAGTGAGTGAGAGAAGCAGGGCTGCTATGTATGGCTGCACACTGC |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesKO7() Testes Data. (Zcchc11 testes) | GSM475281(GSM475281) total RNA. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR037898(GSM510434) ovary_rep3. (ovary) | SRR051941(GSM545785) 18-32 nt total small RNAs (Mov10l-/-). (mov10L testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) |
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