| Gene: Zswim4 | ID: uc009mmg.1_intron_0_0_chr8_86736705_r.3p | SPECIES: mm9 |
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(7) OTHER.mut |
(4) PIWI.ip |
(1) PIWI.mut |
(20) TESTES |
| GATCTCTGAGTTTGAGGCCAAGTGGGGCTGCAGAGTGAGATTAACTGCACCCCTTCACATACACCCCCCCCCAAAAAAAAAACAAAAAACAAAAAAACTGATGAAGCTGGGAGGATTCAGAGCCAATGGTTGTAGGGTGGGAAGGGAAAGGGCAGGGTCTGGCTGCACAGATACACACTCTGCCCTCTCCCCACACCCAGGCCCACCAGCGCTGATGAGCATCATGAAGAACTGGTACTCCTTGTTCACC ......................................................................................................................................(((((....((((.((((((((((.((.((....))...)).)))))))))).))))..))))).................................................... ...................................................................................................................................132.................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR051940(GSM545784) 18-32 nt total small RNAs (Mov10l+/-). (testes) | SRR028731(GSM400968) Mili-wt-associated. (testes) | mjTestesWT3() Testes Data. (testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................................................................................................................................................TCTGCCCTCTCCCCACACCCAGa................................................. | 23 | a | 10.00 | 0.00 | 7.00 | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .......................................................................................................................................................................................................................TGAGCATCATGAAGAACTGGTACTCCT........ | 27 | 1 | 6.00 | 6.00 | - | 1.00 | - | 2.00 | 2.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................TGAGCATCATGAAGAACTGGTACTCCTT....... | 28 | 1 | 3.00 | 3.00 | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ...................................................................................................................................................................................CTGCCCTCTCCCCACACCCAGt................................................. | 22 | t | 3.00 | 0.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ..................................................................................................................................................................................TCTGCCCTCTCCCCACACCCAGt................................................. | 23 | t | 2.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................GTGGGAAGGGAAAGGGCAGGG............................................................................................. | 21 | 1 | 2.00 | 2.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................CGCTGATGAGCATCATGAAGAACTGGT.............. | 27 | 1 | 2.00 | 2.00 | - | - | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................TGGGAAGGGAAAGGGCAGGGTCT.......................................................................................... | 23 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................ACCAGCGCTGATGAGCATCATGAAGAAC.................. | 28 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................CGCTGATGAGCATCATGAAGAACTGGTA............. | 28 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................TCATGAAGAACTGGTACTCCTTGT..... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................TGCCCTCTCCCCACACCCAGt................................................. | 21 | t | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................CTGCCCTCTCCCCACACCCAGtt................................................ | 23 | tt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................GAAGGGAAAGGGCAGGGTCT.......................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................GGAAGGGAAAGGGCAGGGTCTGtaat..................................................................................... | 26 | taat | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ...................................................................................................................................................................................CTGCCCTCTCCCCACACCCAGa................................................. | 22 | a | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| .........................................................................................................................................................................................................................AGCATCATGAAGAACTGGTACTCCTTG...... | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................GCGCTGATGAGCATCATGAAGAACTGGT.............. | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................TGGGAAGGGAAAGGGCAGGGaat.......................................................................................... | 23 | aat | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................AAGGGAAAGGGCAGGGTCTGtat...................................................................................... | 23 | tat | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................CATGAAGAACTGGTACT........... | 17 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ....................................................................................................................................................................................................................TGATGAGCATCATGAAGAACTGGTAC............ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................AAGGGAAAGGGCAGGGTCTGG........................................................................................ | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................TGATGAGCATCATGAAGAACTGGTACT........... | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................TAGGGTGGGAAGGGAAAGGGCAGGG............................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ..................................................................................................................................................................................TCTGCCCTCTCCCCACACCCAGc................................................. | 23 | c | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................GATGAGCATCATGAAGAACTGGTACTCCTT....... | 30 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................GTGGGAAGGGAAAGGGCAG............................................................................................... | 19 | 2 | 0.50 | 0.50 | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................AAACTGATGAAGCTG............................................................................................................................................. | 15 | 16 | 0.06 | 0.06 | - | - | - | - | - | - | - | - | - | - | - | 0.06 | - | - | - | - | - | - | - | - |
| GATCTCTGAGTTTGAGGCCAAGTGGGGCTGCAGAGTGAGATTAACTGCACCCCTTCACATACACCCCCCCCCAAAAAAAAAACAAAAAACAAAAAAACTGATGAAGCTGGGAGGATTCAGAGCCAATGGTTGTAGGGTGGGAAGGGAAAGGGCAGGGTCTGGCTGCACAGATACACACTCTGCCCTCTCCCCACACCCAGGCCCACCAGCGCTGATGAGCATCATGAAGAACTGGTACTCCTTGTTCACC ......................................................................................................................................(((((....((((.((((((((((.((.((....))...)).)))))))))).))))..))))).................................................... ...................................................................................................................................132.................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR051940(GSM545784) 18-32 nt total small RNAs (Mov10l+/-). (testes) | SRR028731(GSM400968) Mili-wt-associated. (testes) | mjTestesWT3() Testes Data. (testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..............................................................................................................................................................................ACACTCTGCCCTCTCCCCACA....................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |