(1)
OTHER.ip
(7)
OTHER.mut
(5)
PIWI.ip
(2)
PIWI.mut
(1)
TDRD1.ip
(36)
TESTES

Sense strand
CCACCCTGAGCAAGGAGATCCGGCCAGTCTGCAGGAAGTTCATGCAGGATGTGAGTAGGGTGACGCCCCAGCTGGCTGGCTGCCTGCCCACCGTGGCCAACACCTCAGCGCAGCAGCTTTGGCCCTCTCTGATGGGCTGGGCCACTCTGCGACAAGCACACTGCTCTCATGGCCTGGAGGATGCTAGGAGGCTTCGCCGGCCTCCTTCCTTCCCCTGGTTTGTCAAACTGGGAGCTGAGTGGTCCACACCTGAGCCAGAGGCAGAGCTTACATCCGGCTTTTGGGAGAGAATTGTTTACTGAGGTTGGGTGCAACAGGCCCTCTGGGAATCATCAATACAGAGGAGCTGCTCTCTGGAAGGTTCCGGGCACATGAGACGCCCAGAAGTGAGCCCTACTCGCCCCTTCCTGCTTCCCTCCCCACACAGCCTATGGAGGTGTTTGTGGACGACGAGACCAAGCTCACACTGCATGGGCT
.....................................................................................................................................................................................................................((..(((.....)))..)).(((...(((..((....))..)))..))).((((...(((((((((((...(((.......)))...))))))))))).....(((((((((.((....))....)))))).))))))).............................................................................................................................
.....................................................................................................................................................................................................................214.........................................................................................................................................354.........................................................................................................................
Size Perfect hit Total Norm Perfect Norm SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
GSM475280(GSM475280)
Mili-IP. (mili testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)
mjTestesWT3()
Testes Data. (testes)
SRR014235(GSM319959)
2 dpp total. (testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR014236(GSM319960)
10 dpp total. (testes)
SRR028731(GSM400968)
Mili-wt-associated. (testes)
SRR363958(GSM822760)
Adult-WTSmall RNA Miwi IP. (testes)
SRR051939(GSM545783)
Mov10L1-associated piRNAs. (mov10L testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
mjTestesKO5()
Testes Data. (Zcchc11 testes)
SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR037901(GSM510437)
testes_rep2. (testes)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
GSM475281(GSM475281)
total RNA. (testes)
SRR029040(GSM433292)
6w_hetero_tdrd6-KO. (tdrd6 testes)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR028730(GSM400967)
Tdrd1-associated. (tdrd1 testes)
GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)
SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)
SRR037902(GSM510438)
testes_rep3. (testes)
GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)
...................................................................................................................................................................................................................................................................................................................................TGGGAATCATCAATACAGAGGAGCTGC............................................................................................................................... 27 1 18.00 18.00 9.00 4.00 2.00 - - - 1.00 - - - - - - - - - - - 1.00 - 1.00 - - - - - - - - - - - - - - -
...................................................................................................................................................................................................................................................................................................................................TGGGAATCATCAATACAGAGGAGCTGCT.............................................................................................................................. 28 1 11.00 11.00 6.00 3.00 - - 2.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGACGACGAGACCAAGCTCACACTGC....... 27 1 8.00 8.00 2.00 1.00 - - 2.00 - - 1.00 1.00 - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - -
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGACGACGAGACCAAGCTCACACTG........ 28 1 5.00 5.00 1.00 2.00 - - - - - - 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
...................................................................................................................................................................................................................................................................................................................................TGGGAATCATCAATACAGAGGAGCTG................................................................................................................................ 26 1 5.00 5.00 2.00 2.00 - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - -
......TGAGCAAGGAGATCCGGCCAGTCTGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................ 27 1 5.00 5.00 1.00 1.00 - 2.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGACGACGAGACCAAGCTCACACTGC....... 29 1 4.00 4.00 1.00 3.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
......TGAGCAAGGAGATCCGGCCAGTCTGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................. 26 1 4.00 4.00 1.00 1.00 - 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
...................................................................................................................................................................................................................................................................................................................................TGGGAATCATCAATACAGAGGAGCTGCTC............................................................................................................................. 29 1 4.00 4.00 1.00 2.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGACGACGAGACCAAGCTCACACTGt....... 29 t 4.00 5.00 2.00 - 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAGGTGTTTGTGGACGACGAGACC.................... 26 1 3.00 3.00 - - - - - - - - 1.00 - - - - - - 1.00 - - - - - - - - - 1.00 - - - - - - - - - -
.................................................................................................................................................................................................................................................................................................AATTGTTTACTGAGGTTGGGTGCAAC.................................................................................................................................................................. 26 1 3.00 3.00 - - - - - - - - - 1.00 - - - - 1.00 - - - - - - - - - - - - - - 1.00 - - - - - -
.............................................................................................................................................................................................................................................................................................AGAGAATTGTTTACTGAGGTTGGGTGC..................................................................................................................................................................... 27 1 3.00 3.00 - - 2.00 - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
.......................................................................................................................................................................................................................................................................................................................................AATCATCAATACAGAGGAGCTGCTCTC........................................................................................................................... 27 1 3.00 3.00 - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - 1.00 - - - - - - - 1.00 -
........AGCAAGGAGATCCGGCCAGTCTGCAGt.......................................................................................................................................................................................................................................................................................................................................................................................................................................................... 27 t 2.00 2.00 - 2.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
........AGCAAGGAGATCCGGCCAGTCTGCAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................... 27 1 2.00 2.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - -
........................................................................................................................................................................................................................................................................................................................................ATCATCAATACAGAGGAGCTGCTCTCT.......................................................................................................................... 27 1 2.00 2.00 - - - - - - - - - - - - 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - -
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGACGACGAGACCAAGCTCACACTt........ 28 t 2.00 1.00 - - - - - - - 2.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
......................................................................................................................................................................................................................................................................................................................................GAATCATCAATACAGAGGAGCTGCTCTC........................................................................................................................... 28 1 2.00 2.00 - - 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
........AGCAAGGAGATCCGGCCAGTCTGCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................... 26 1 2.00 2.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.............................................................................................................................................................................................................................................................................................AGAGAATTGTTTACTGAGGTTGGGTG...................................................................................................................................................................... 26 1 2.00 2.00 - 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.................................................................................................................................................................................................................................................................................................................................TCTGGGAATCATCAATACAGAGG..................................................................................................................................... 23 1 2.00 2.00 - - - - - - - - - - - 2.00 - - - - - - - - - - - - - - - - - - - - - - - -
.............................................................................................................................................................................................................................................................................................................................................................................................................................................TATGGAGGTGTTTGTGGACGACGAGA...................... 26 1 2.00 2.00 - - - - - 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - -
................................................................................................................................................................................................................................................................................TCCGGCTTTTGGGAGAGAATTGTTTAC.................................................................................................................................................................................. 27 1 2.00 2.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGACGACGAGACCAAGCTCACAC.......... 26 1 2.00 2.00 - - - 1.00 - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - -
...................................................................................................................................................................................................................................................................GGCAGAGCTTACATCCGGC....................................................................................................................................................................................................... 19 1 2.00 2.00 - - - - - - - - - - - - - 2.00 - - - - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGACGACGAGACCAAGCTCACACTGCA...... 28 1 2.00 2.00 - 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.................................................................................................................................................................................................................................................GTCCACACCTGAGCCAGAGGCAGAGC.................................................................................................................................................................................................................. 26 1 2.00 2.00 1.00 - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGACGACGAGACCAA.................. 17 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
..........................................................................................................................................................................................................................TTTGTCAAACTGGGAGCTGAGTGGT.......................................................................................................................................................................................................................................... 25 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................................................................................................................GGAGAGAATTGTTTACTGAGGTTG.......................................................................................................................................................................... 24 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
...................................................................................................................................................................................................................................................................................................................................................AGAGGAGCTGCTCTCTGGAAGGTcc................................................................................................................. 25 cc 1.00 0.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - -
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAGGTGTTTGTGGACGACGAGA...................... 24 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
..ACCCTGAGCAAGGAGATCCGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 22 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
................................................................................................................................................................................................................................................................................................GAATTGTTTACTGAGGTTGGGTGCAA................................................................................................................................................................... 26 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
..................................................................................................................................................................................................................................................................................................................................................................TGGAAGGTTCCGGGCACATGAGACGCCCAG............................................................................................. 30 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.................................................................................................................................................................................................................................................GTCCACACCTGAGCCAGAGGCAGAGCT................................................................................................................................................................................................................. 27 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
......TGAGCAAGGAGATCCGGCCAGTCTGCAa........................................................................................................................................................................................................................................................................................................................................................................................................................................................... 28 a 1.00 5.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTTGTGGACGACGAGACCAAG................. 23 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - -
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGACGACGAGACCAAGCTCACACTGCATt.... 30 t 1.00 0.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................................................................................................................GGAGAGAATTGTTTACTGAGGTTGGGT....................................................................................................................................................................... 27 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.............................................................................................................................................................................................................................................................................................................................................................................................................................................TATGGAGGTGTTTGTGGACGACGAGACCAAGC................ 32 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
...................................................................................................................................................................................................................................................................................................................................TGGGAATCATCAATACAGAGGAGCTGCTCT............................................................................................................................ 30 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
...............................................................................................................................................................................................................................................................................................AGAATTGTTTACTGAGGTTGGGTGC..................................................................................................................................................................... 25 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - -
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGACGACGAGACCAAGCTCACACT......... 27 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
...................................................................................................................................................................................................................................................................................................................................TGGGAATCATCAATACAGAGGAGCT................................................................................................................................. 25 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
..ACCCTGAGCAAGGAGATCtggc..................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 22 tggc 1.00 0.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
...................................................................................................................................................TGCGACAAGCACACTGCTCTCATGGCC............................................................................................................................................................................................................................................................................................................... 27 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
...........................................GCAGGATGTGAGTAGGGTGACGCCCCAGC..................................................................................................................................................................................................................................................................................................................................................................................................................... 29 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
..............................................................................................................................................................................................................................................................................................................................................................TCTCTGGAAGGTTCCGGGCACATGAGA.................................................................................................... 27 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
....................................................................................................................................................................................................................................................................................................................................................GAGGAGCTGCTCTCTGGAAGGTTCCGGt............................................................................................................. 28 t 1.00 0.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
................................................................................................................................................................................................................................................................................................GAATTGTTTACTGAGGTTGGGTGCA.................................................................................................................................................................... 25 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
....CCTGAGCAAGGAGATCCGGCa.................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 21 a 1.00 0.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
..................................................GTGAGTAGGGTGACGCCCCAGCTGGCTG............................................................................................................................................................................................................................................................................................................................................................................................................... 28 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
..................................................................................................................................................................................................................................................................................................ATTGTTTACTGAGGTTGGGTGCAACAGGC.............................................................................................................................................................. 29 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - -
.................................................................................................................................................................................................................................................GTCCACACCTGAGCCAGAGGCAGAGCTT................................................................................................................................................................................................................ 28 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.......................................................................................................................................................ACAAGCACACTGCTCTCATGGCCTGGAGGA........................................................................................................................................................................................................................................................................................................ 30 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
........................................................................................................................................CTGGGCCACTCTGCGACAAGCAC.............................................................................................................................................................................................................................................................................................................................. 23 1 1.00 1.00 - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
...................................................................................................................................ATGGGCTGGGCCACTCTGCGACAAGCACACT........................................................................................................................................................................................................................................................................................................................... 31 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - -
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGACGACGAGACCAAGCTCACAC.......... 25 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
.........................................................................................................................................................................................................................................................................................................ACTGAGGTTGGGTGCAACAGGCCCTC.......................................................................................................................................................... 26 1 1.00 1.00 - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - -
..........................................TGCAGGATGTGAGTAGGGTGACGCCCCAGC..................................................................................................................................................................................................................................................................................................................................................................................................................... 30 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - -
...............................................................................................................................................................................................................................................................................ATCCGGCTTTTGGGAGAGAATTGTTT.................................................................................................................................................................................... 26 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
..........................................TGCAGGATGTGAGTAGGGTGACGCCCCA....................................................................................................................................................................................................................................................................................................................................................................................................................... 28 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
..................................................................................................................................................................................................................................................................................................................................................................TGGAAGGTTCCGGGCACATGAGACGC................................................................................................. 26 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
..........................................................................................................................................................................................................................................................................................GGGAGAGAATTGTTTACTGAGGTTGGG........................................................................................................................................................................ 27 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
......................................................................................................................................................................................................................................................................................................................................................................................AGACGCCCAGAAGTGAGCCCTACTCGCCCC......................................................................... 30 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................................................................................................................................................................................................GGAATCATCAATACAGAGGAGCTGCTCTCT.......................................................................................................................... 30 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - -
.................................................................................................................................................................................................................................................................................................AATTGTTTACTGAGGTTGGGTGCAACAGGCt............................................................................................................................................................. 31 t 1.00 0.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.................................................................................................................................................TCTGCGACAAGCACACTGCTCTCATGG................................................................................................................................................................................................................................................................................................................. 27 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
............AGGAGATCCGGCCAGTCTGCAGGAAt....................................................................................................................................................................................................................................................................................................................................................................................................................................................... 26 t 1.00 0.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.........................................................................................................................................................................................................................................................................................................ACTGAGGTTGGGTGCAACAGGCCCTt.......................................................................................................................................................... 26 t 1.00 0.00 - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGACGACGAGACCAAGCTCACACTGCATG.... 30 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - -
.............................TGCAGGAAGTTCATGCAGGATGTGAGTA.................................................................................................................................................................................................................................................................................................................................................................................................................................... 28 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................................................................................................................................................................................................................................................................CCTATGGAGGTGTTTGTGGAC............................. 21 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - -
..........................................................................................................................................................................................................................................................................................................................................CATCAATACAGAGGAGCTGCTCTC........................................................................................................................... 24 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
....................................................................................................................................................................................................................................................................................................................................................................................TGAGACGCCCAGAAGTGAGCCCTACTCGCCa.......................................................................... 31 a 1.00 1.00 - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
...................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGTTTGTGGACGACGAGACCAAGC................ 26 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.........................................ATGCAGGATGTGAGTAGGGTGACGCC.......................................................................................................................................................................................................................................................................................................................................................................................................................... 26 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - -
......................................................................................................................................................................................................................CTGGTTTGTCAAACTGGGAGCTGA............................................................................................................................................................................................................................................... 24 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
....................................................................................................................................................................TCTCATGGCCTGGAGGATGCTAGGAGG.............................................................................................................................................................................................................................................................................................. 27 1 1.00 1.00 - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
..................................................................................................................................................................................................................................................................................................................................................................TGGAAGGTTCCGGGCACATGAGACGCC................................................................................................ 27 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.................................................................................................................................................................................................................................................................................................AATTGTTTACTGAGGTTGGGTGCAA................................................................................................................................................................... 25 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
........AGCAAGGAGATCCGGCCAatc................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 21 atc 1.00 0.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
........................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGGACGACGAGACCAAGCTCACACTGt....... 30 t 1.00 0.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
......TGAGCAAGGAGATCCGGCCAGTCTGCt............................................................................................................................................................................................................................................................................................................................................................................................................................................................ 27 t 1.00 4.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
...................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGTTTGTGGACGACGAGACCAAGCTt.............. 28 t 1.00 0.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGACGACGAGACCAAGCTCACACTG........ 26 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
................................................................................................................................................................................................................................................................................................................................................TACAGAGGAGCTGCTCTCTGGAAG..................................................................................................................... 24 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
..........................................TGCAGGATGTGAGTAGGGTGACGCCCC........................................................................................................................................................................................................................................................................................................................................................................................................................ 27 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
....................................................................................................................................................................................................................................................................................................................................................................................TGAGACGCCCAGAAGTGAGCCCTACT............................................................................... 26 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.....CTGAGCAAGGAGATCCGGCCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 21 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
............................................................................................................................................................................................................................................................................................................................................................................................................................................CTATGGAGGTGTTTGTGGACGACGAGACCAAGCT............... 34 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
............................................................................................................................................................................................................................................................................................................................................................................................................................................CTATGGAGGTGTTTGTGGA.............................. 19 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - -
...................CCGGCCAGTCTGCAGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................... 17 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGAGACCAAGCTCACACTGCAT..... 24 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGACGACGAGACCAAGCTCACAa.......... 26 a 1.00 0.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAGACCAAGCTCACA........... 17 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
..............................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAGGTGTTTGTGGACGACGAGACC.................... 27 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - -
...................................................................................................................................................................................................................................................................................................................................TGGGAATCATCAATACAGAGGAGCTGCTCTC........................................................................................................................... 31 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
....................................................................................................................................................................................................................................................................................................................................................................................TGAGACGCCCAGAAGTGAGCCCTACTCGCC........................................................................... 30 1 1.00 1.00 - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
........................................................................................................................................................................................................................................................................................................................................ATCATCAATACAGAGGAGCTGCTCTC........................................................................................................................... 26 1 1.00 1.00 - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
......TGAGCAAGGAGATCCGGCCAGTCTGCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................... 28 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.............................................................................................................................................................................................................................................................................................................................................................................................................................................TATGGAGGTGTTTGTGG............................... 17 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
...................................................................................................................................................TGCGACAAGCACACTGCTCTCATGGCCT.............................................................................................................................................................................................................................................................................................................. 28 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - -
.............................................................................................................................................................................................................................................AGTGGTCCACACCTGAGCCAGAGGCAG..................................................................................................................................................................................................................... 27 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Antisense strand
CCACCCTGAGCAAGGAGATCCGGCCAGTCTGCAGGAAGTTCATGCAGGATGTGAGTAGGGTGACGCCCCAGCTGGCTGGCTGCCTGCCCACCGTGGCCAACACCTCAGCGCAGCAGCTTTGGCCCTCTCTGATGGGCTGGGCCACTCTGCGACAAGCACACTGCTCTCATGGCCTGGAGGATGCTAGGAGGCTTCGCCGGCCTCCTTCCTTCCCCTGGTTTGTCAAACTGGGAGCTGAGTGGTCCACACCTGAGCCAGAGGCAGAGCTTACATCCGGCTTTTGGGAGAGAATTGTTTACTGAGGTTGGGTGCAACAGGCCCTCTGGGAATCATCAATACAGAGGAGCTGCTCTCTGGAAGGTTCCGGGCACATGAGACGCCCAGAAGTGAGCCCTACTCGCCCCTTCCTGCTTCCCTCCCCACACAGCCTATGGAGGTGTTTGTGGACGACGAGACCAAGCTCACACTGCATGGGCT
.....................................................................................................................................................................................................................((..(((.....)))..)).(((...(((..((....))..)))..))).((((...(((((((((((...(((.......)))...))))))))))).....(((((((((.((....))....)))))).))))))).............................................................................................................................
.....................................................................................................................................................................................................................214.........................................................................................................................................354.........................................................................................................................
Size Perfect hit Total Norm Perfect Norm SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
GSM475280(GSM475280)
Mili-IP. (mili testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)
mjTestesWT3()
Testes Data. (testes)
SRR014235(GSM319959)
2 dpp total. (testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR014236(GSM319960)
10 dpp total. (testes)
SRR028731(GSM400968)
Mili-wt-associated. (testes)
SRR363958(GSM822760)
Adult-WTSmall RNA Miwi IP. (testes)
SRR051939(GSM545783)
Mov10L1-associated piRNAs. (mov10L testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
mjTestesKO5()
Testes Data. (Zcchc11 testes)
SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR037901(GSM510437)
testes_rep2. (testes)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
GSM475281(GSM475281)
total RNA. (testes)
SRR029040(GSM433292)
6w_hetero_tdrd6-KO. (tdrd6 testes)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR028730(GSM400967)
Tdrd1-associated. (tdrd1 testes)
GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)
SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)
SRR037902(GSM510438)
testes_rep3. (testes)
GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)
................GATCCGGCCAGTCTGCAGGAAGTTCA................................................................................................................................................................................................................................................................................................................................................................................................................................................... 26 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
........................................................................................................................................................................................................................................................................................................................AACAGGCCCTCTGGGAATCATCAATACA......................................................................................................................................... 28 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
..........................................................................................................AGCGCAGCAGCTTTGGCCCTCTCTG.......................................................................................................................................................................................................................................................................................................................................................... 25 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00