| Gene: Arhgap10 | ID: uc009mhm.1_intron_16_0_chr8_79944076_r | SPECIES: mm9 |
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(3) OTHER.mut |
(1) PIWI.mut |
(11) TESTES |
| GCAAGCTCCAGGAAATCCAAGAAAGAAAGAAGTTCGAGTTTGTGGAGCCTGTGAGTAGCAGGACACTCGTTGCTGTGGATCCTTGTGAAAACACTAAGGGAGACCTCACAGGTTGTCAAGGGTGGACACAGCTAGGGAAAGTCTAGAGAAACATCTAAACCGTTGGGAGGCCCTGTTGGCACAGCTTCCTCCTCACCCCAGTGAGGGGCACAGCCCCCCCGCCATACCGTGACCCCTGTCCCCACTCTGTTACAGGCATGGCGATAGACCTTTATGTGGGTGCTAGGGAATTTGAACTCACAACTTGTTCATAATTTTCTGTACAGACCACCTATTTACAGTTATTTAATTTCTAGTGACTTCTTTGGAACTACTTTCATTTCAGGACGTGACAGACAGGGAGGTGGTTGGGTGCTCCGGATGGCAGTGCTCTGGATGGTGGTTTTGATGCAGGCGTTGCTTGCTTCCTTCCTTGCATGCACTAACTAACGCTCCTCTCCTTTGTCATAGATGCTGTCCTTCTTTCAGGGAATGTTCACTTTCTATCATCAAGGCCACGA |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesWT3() Testes Data. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) |
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| ......................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGGTGCTCCGGATGGCAGTGCTCTGGATGGTGGTTTTGATGCAGGCGTT...................................................................................................... | 52 | 1 | 34.00 | 34.00 | 34.00 | - | - | - | - | - | - | - | - | - | - |
| ..........................AAGAAGTTCGAGTTTGTGGAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ | 22 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .............................AAGTTCGAGTTTGTGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 17 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................................................................................................................................GTGACTTCTTTGGAACTACTTTCATTTCAGGACG........................................................................................................................................................................... | 34 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ................................TTCGAGTTTGTGGAGCCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 18 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ......................AAGAAAGAAGTTCGAGTTTGTGGAGCCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ................................................................................................................................................................................................................................................................................TATGTGGGTGCTAGGGAATTgaaa........................................................................................................................................................................................................................................................................ | 24 | gaaa | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ...................AGAAAGAAAGAAGTTCGAGTTTGTGGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .....................AAAGAAAGAAGTTCGAGTTTGTGGAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ...............................GTTCGAGTTTGTGGAGCCTatgc.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 23 | atgc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ..............................................................................................................................................CTAGAGAAACATCTAAACCGTTGGGAGG...................................................................................................................................................................................................................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .......................AGAAAGAAGTTCGAGTTTGTGGAGCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ........................GAAAGAAGTTCGAGTTTGTGGAGCCTa............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 27 | a | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ...................................GAGTTTGTGGAGCCTGTGAGTAGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ...........................AGAAGTTCGAGTTTGTGGAGCCTatg........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 26 | atg | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................................................................................................TTTCAGGACGTGACAG..................................................................................................................................................................... | 16 | 4 | 0.25 | 0.25 | - | 0.25 | - | - | - | - | - | - | - | - | - |
| GCAAGCTCCAGGAAATCCAAGAAAGAAAGAAGTTCGAGTTTGTGGAGCCTGTGAGTAGCAGGACACTCGTTGCTGTGGATCCTTGTGAAAACACTAAGGGAGACCTCACAGGTTGTCAAGGGTGGACACAGCTAGGGAAAGTCTAGAGAAACATCTAAACCGTTGGGAGGCCCTGTTGGCACAGCTTCCTCCTCACCCCAGTGAGGGGCACAGCCCCCCCGCCATACCGTGACCCCTGTCCCCACTCTGTTACAGGCATGGCGATAGACCTTTATGTGGGTGCTAGGGAATTTGAACTCACAACTTGTTCATAATTTTCTGTACAGACCACCTATTTACAGTTATTTAATTTCTAGTGACTTCTTTGGAACTACTTTCATTTCAGGACGTGACAGACAGGGAGGTGGTTGGGTGCTCCGGATGGCAGTGCTCTGGATGGTGGTTTTGATGCAGGCGTTGCTTGCTTCCTTCCTTGCATGCACTAACTAACGCTCCTCTCCTTTGTCATAGATGCTGTCCTTCTTTCAGGGAATGTTCACTTTCTATCATCAAGGCCACGA |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesWT3() Testes Data. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) |
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