| Gene: Rab8A | ID: uc009mfj.1_intron_0_0_chr8_74685382_f.5p | SPECIES: mm9 |
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(5) OTHER.mut |
(2) PIWI.ip |
(1) PIWI.mut |
(18) TESTES |
| GTTCCGCTTCTCCGAGGACGCCTTCAACTCCACATTCATCTCTACCATAGGTAGCGGGGCCTTGGGCGGCCGGTGACCAGGGCTGGACGCGCCCCTATGGGGCTGGGCTGAGGGATCGACTCAGGATCCACTCGGGCCGAGGATCCGGGAGGGTCACGGGGCTGGACAGAGAACCGCAGCGGCCTCCACCTCCCGCCAGGGAGTCCAGGCCGGGACCCTGGCGGGCGCCGGAGACCAAGGTGCAGACAGG |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | mjTestesWT1() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesWT3() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR037901(GSM510437) testes_rep2. (testes) | GSM475281(GSM475281) total RNA. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................................................................................................................................TGGACAGAGAACCGCAGCGGCCTCCACC............................................................ | 28 | 1 | 10.00 | 10.00 | 5.00 | 3.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .................................................................................................TGGGGCTGGGCTGAGGGATCGACTC................................................................................................................................ | 25 | 1 | 7.00 | 7.00 | 4.00 | - | - | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................ATGGGGCTGGGCTGAGGGATCGACTC................................................................................................................................ | 26 | 1 | 6.00 | 6.00 | 6.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................GAGGGTCACGGGGCTGGA.................................................................................... | 18 | 1 | 5.00 | 5.00 | - | - | - | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................TGGACAGAGAACCGCAGCGGCCTCCAC............................................................. | 27 | 1 | 4.00 | 4.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................TCTACCATAGGTAGCGGGGCCTTGGt........................................................................................................................................................................................ | 26 | t | 2.00 | 0.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................TACCATAGGTAGCGGGGCCTTGGGCGGC.................................................................................................................................................................................... | 28 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | 1.00 | - | - | - | - | - |
| ..........TCCGAGGACGCCTTCAACTCCACATTC..................................................................................................................................................................................................................... | 27 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................TTGGGCGGCCGGTGACCAGGGCTGGA................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........TCCGAGGACGCCTTCAACTCCACATTCATCT................................................................................................................................................................................................................. | 31 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .....GCTTCTCCGAGGACaca.................................................................................................................................................................................................................................... | 17 | aca | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ..................................................................................................................................................................TGGACAGAGAACCGCAGCGGCCTCCA.............................................................. | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........TCCGAGGACGCCTTCAACTCCACATTa..................................................................................................................................................................................................................... | 27 | a | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................TTCAACTCCACATTCATCTCTACCATAGGaa..................................................................................................................................................................................................... | 31 | aa | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ...............................................TAGGTAGCGGGGCCTTGGGCGGCCGG................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................TACCATAGGTAGCGGGGCCTTG.......................................................................................................................................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................ACGCCTTCAACTCCACAaag..................................................................................................................................................................................................................... | 20 | aag | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .................................................................................................TGGGGCTGGGCTGAGGGATCGACT................................................................................................................................. | 24 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......TTCTCCGAGGACGCCTTCAACTCCACAaa...................................................................................................................................................................................................................... | 29 | aa | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .................................................................................................TGGGGCTGGGCTGAGGGATCGACTCtt.............................................................................................................................. | 27 | tt | 1.00 | 7.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..........................................TACCATAGGTAGCGGGGCCTTGGGCGG..................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..TCCGCTTCTCCGAGGACGCCTTCAAC.............................................................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..........TCCGAGGACGCCTTCAACTCCACATTCATtt................................................................................................................................................................................................................. | 31 | tt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .................................................................................................TGGGGCTGGGCTGAGG......................................................................................................................................... | 16 | 15 | 0.07 | 0.07 | - | - | - | - | - | - | - | - | - | 0.07 | - | - | - | - | - | - | - | - |
| GTTCCGCTTCTCCGAGGACGCCTTCAACTCCACATTCATCTCTACCATAGGTAGCGGGGCCTTGGGCGGCCGGTGACCAGGGCTGGACGCGCCCCTATGGGGCTGGGCTGAGGGATCGACTCAGGATCCACTCGGGCCGAGGATCCGGGAGGGTCACGGGGCTGGACAGAGAACCGCAGCGGCCTCCACCTCCCGCCAGGGAGTCCAGGCCGGGACCCTGGCGGGCGCCGGAGACCAAGGTGCAGACAGG |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | mjTestesWT1() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesWT3() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR037901(GSM510437) testes_rep2. (testes) | GSM475281(GSM475281) total RNA. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .....................CTTCAACTCCACATTCATCTCTACCA........................................................................................................................................................................................................... | 26 | 1 | 15.00 | 15.00 | 6.00 | - | 2.00 | - | 2.00 | - | - | - | 3.00 | - | 1.00 | - | - | - | 1.00 | - | - | - |
| ..................CGCCTTCAACTCCACATTCATCTCTACCA........................................................................................................................................................................................................... | 29 | 1 | 8.00 | 8.00 | - | 8.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................ACTCAGGATCCACTCacg..................................................................................................................... | 18 | acg | 2.00 | 0.00 | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - |
| ................GACGCCTTCAACTCCACATTCATCTCT............................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..................................................................................................................ACTCAGGATCCACTCacgg..................................................................................................................... | 19 | acgg | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .....GCTTCTCCGAGGACGCCTTCAACTCCAC......................................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ................GACGCCTTCAACTCCACATTCATCT................................................................................................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................GACGCCTTCAACTCCACATTCATCTCTA.............................................................................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................CTCAGGATCCACTCGGGCCG............................................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ................GACGCCTTCAACTCCACATTCATCTCTAC............................................................................................................................................................................................................. | 29 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |