| Gene: Gtpbp3 | ID: uc009mdn.1_intron_3_0_chr8_74014437_f | SPECIES: mm9 |
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(2) OTHER.mut |
(8) PIWI.ip |
(2) PIWI.mut |
(1) TDRD1.ip |
(27) TESTES |
| ATGGGGAACTGAGCCAGCTCTGCCAGGGCTGGGCAAAGACTCTCACCAAGGCAAGCCTGCATGTTCACCCATTCATGTGTTCTCTTTTTCTCTTTAAGATTTATATTACTTATATTGTTTATGTTGTGTTTATGAGTGCTCTATTTGCTTGTATGTCTGCACACCAGAAGAGGGCATCAGATCCCATTACAGATGGTTGTGAGCAACCATATGGTTGCTGGGAATTAAATTCAGACTTCTGGAAGAGCAGCCAGTGCACTTAAACCAACAAGCCATCTCTCCAGCTCCATCCATGCATCCTTTAGAGAAAGTTCTAGGCCTGTGAGAGGCCAGTCTGGTTGTATAGATCAAACTGGAGTTAGACCTGAGACTGAGAGAGCACCTGTGACATCTCCCCTCCTCCCCAGGCTCTGGCCTATGTGGAGGCCTACATTGACTTCGGAGAGGATGATAATTT ......................................................................................................................................................................................................................(((.(((........(((((....)))))...(((.....))).......))).)))..((((((((.(((((((((.(((((.((..(((((....)))))(((((.....))))).....)).))))).))......))))))).))...)))).)).................................................................................... .....................................................................................................................................................................................................................214.............................................................................................................................................................374................................................................................. |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR028730(GSM400967) Tdrd1-associated. (tdrd1 testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .......................................................................................................................................................................................................................................................................................................................................................TAGATCAAACTGGAGTTAGACCTGAGA....................................................................................... | 27 | 1 | 8.00 | 8.00 | 2.00 | 1.00 | 1.00 | 1.00 | 2.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................TGGGAATTAAATTCAGACTTCTGGAAGAGC................................................................................................................................................................................................................. | 30 | 1 | 7.00 | 7.00 | - | - | - | 1.00 | 4.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGAGGCCTACATTGACTTCGGAGA............ | 27 | 1 | 7.00 | 7.00 | - | - | 1.00 | - | - | 4.00 | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................................................................................................TATAGATCAAACTGGAGTTAGACCTG.......................................................................................... | 26 | 1 | 4.00 | 4.00 | 2.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................TGGGAATTAAATTCAGACTTCTGGAAGA................................................................................................................................................................................................................... | 28 | 1 | 4.00 | 4.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .................................................................................................................................................................................................................................................................................................................................................................TGGAGTTAGACCTGAGACTGAGAGAGC............................................................................. | 27 | 1 | 4.00 | 4.00 | 1.00 | 2.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................................................TCCATGCATCCTTTAGAGAAAGTTCT.............................................................................................................................................. | 26 | 1 | 3.00 | 3.00 | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................CATCAGATCCCATTACAGATGGTTGTttt.............................................................................................................................................................................................................................................................. | 29 | ttt | 2.00 | 0.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................TGGGAATTAAATTCAGACTTCTGGAA..................................................................................................................................................................................................................... | 26 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................GTTGCTGGGAATTAttt................................................................................................................................................................................................................................... | 17 | ttt | 2.00 | 0.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................GTTGCTGGGAATTAAAaaaa................................................................................................................................................................................................................................ | 20 | aaaa | 2.00 | 0.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................TGCCAGGGCTGGGCAAAGACTCTCACCAAG....................................................................................................................................................................................................................................................................................................................................................................................................................... | 30 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................................................................................GATCAAACTGGAGTTAGACCTGAGACTG.................................................................................... | 28 | 1 | 2.00 | 2.00 | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................................................................................................................TGTATAGATCAAACTGGAGTTAGACCTG.......................................................................................... | 28 | 1 | 2.00 | 2.00 | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................................................................................................................TGGAGTTAGACCTGAGACTGAGAGAGa............................................................................. | 27 | a | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................................................................................................................................TACATTGACTTCGGAGAGGATGATAA... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................................................TCCATCCATGCATCCTTTAGAGAAAGTTCT.............................................................................................................................................. | 30 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................TTACAGATGGTTGTGAGCAACCATAa..................................................................................................................................................................................................................................................... | 26 | a | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................TCCCATTACAGATGGTTGTGAGCAACCATAag.................................................................................................................................................................................................................................................... | 32 | ag | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................TGGTTGCTGGGAATTAAAaaaa................................................................................................................................................................................................................................ | 22 | aaaa | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................................TCCTTTAGAGAAAGTTCTAGGCCTGTa..................................................................................................................................... | 27 | a | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................AATTAAATTCAGACTTCTGGAAGAGC................................................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................................................................................................................TGGTTGTATAGATCAAACTGGAGTTAGAC............................................................................................. | 29 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................................................................................................................................TGAGACTGAGAGAGCACCTGTGACATt................................................................. | 27 | t | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................................................TGCATCCTTTAGAGAAAGTTCTAGGCC......................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................................TCCTTTAGAGAAAGTTCTAGGCCTGTGA.................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .TGGGGAACTGAGCCAGCTCTGCCAGGa............................................................................................................................................................................................................................................................................................................................................................................................................................................. | 27 | a | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................................................................................................................................................................TGTGACATCTCCCCTCCTCCCCAGGCTC.............................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................TGGGAATTAAATTCAGACTTCTGGAAG.................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................................................................ATCAAACTGGAGTTAGACCTGAGcct..................................................................................... | 26 | cct | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................AATTCAGACTTCTGGAAGAGCAGCCAGTG......................................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .....................GCCAGGGCTGGGCAAAGACTCTCACCA......................................................................................................................................................................................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................TGGGAATTAAATTCAGACTTCTGGAAGAG.................................................................................................................................................................................................................. | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................................................................................................................................TACATTGACTTCGGAGAGGATGATA.... | 25 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................................................................................................GACCTGAGACTGAGAGAGCACCTGTG...................................................................... | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................................................................................................................................................TGAGAGAGCACCTGTGACATCTCCCCT........................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................AAATTCAGACTTCTGGAAGAGCAGCCAG........................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................................................................TGAGAGGCCAGTCTGGTTGTATAGATC............................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................................................................................GATCAAACTGGAGTTAGACCTGAGACT..................................................................................... | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................................................................................................................AAACTGGAGTTAGACCTGAGACTGAGAG................................................................................ | 28 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................................................................AGAAAGTTCTAGGCCTGTGAGAGGCCAGTC.......................................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................................................................................................................................TGAGACTGAGAGAGCACCTGTGACATCTCC.............................................................. | 30 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................AGGGCTGGGCAAAGACTCTCACCAAGGCt.................................................................................................................................................................................................................................................................................................................................................................................................................... | 29 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................TAAATTCAGACTTCTGGAAGAGCAGCC............................................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGACTTCGGAGAGGATGA...... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................TGCTGGGAATTAAATTCAGACTTCTGa....................................................................................................................................................................................................................... | 27 | a | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................................................................................................GGAGTTAGACCTGAGACTGAGAGAGCA............................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................................TAGGCCTGTGAGAGGCCAGTCTGGTT..................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................TTAAATTCAGACTTCTGGAAGAGCAG............................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................TGCCAGGGCTGGGCAAAGACTCTCAC........................................................................................................................................................................................................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................................................................................TAGATCAAACTGGAGTTAGACCTGA......................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................TTAAATTCAGACTTCTGGAAGAGCAGC.............................................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGAGGCCTACATTGACTTCGGAGt............ | 27 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................................................................................................................................................................................................ACATTGACTTCGGAGAGGATGATA.... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................TTGCTGGGAATTAAATTCAGACTTCTGa....................................................................................................................................................................................................................... | 28 | a | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................................................................................................TAGACCTGAGACTGAGAGAGCACCTGT....................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................GTTGCTGGGAATTAAATTCAGACTTCTGG....................................................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................................................................................................................TGGTTGTATAGATCAAACTGGAGTTA................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................................................................................................................................................TGAGAGAGCACCTGTGACATCTCCCCTC.......................................................... | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................................................TGCATCCTTTAGAGAAAGTTCTAtgc.......................................................................................................................................... | 26 | tgc | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................GTTGCTGGGAATTAAATTCAGACTTCTG........................................................................................................................................................................................................................ | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................TTAAATTCAGACTTCTGGAAGAGCAGCC............................................................................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................GCAGCCAGTGCACTTAAACCAACAAG......................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................................................................................................TAGACCTGAGACTGAGAGAGCACCTGTG...................................................................... | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................................................................................TAGATCAAACTGGAGTTAGACCTGAG........................................................................................ | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................TAAATTCAGACTTCTGGAAGAGCA................................................................................................................................................................................................................ | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................................................................................................................TGTATAGATCAAACTGGAGTTAGACatg.......................................................................................... | 28 | atg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGACTTCGGAGAGGATGAT..... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................................................................................................................................................CTACATTGACTTCGGAGAGGATGATA.... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................................................................................................................................AGACCTGAGACTGAGAG................................................................................ | 17 | 2 | 0.50 | 0.50 | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACTTCGGAGAGGATGA...... | 18 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................TATGGTTGCTGGGAATTAAATTCA................................................................................................................................................................................................................................ | 24 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................CCAGGGCTGGGCAAAGA.................................................................................................................................................................................................................................................................................................................................................................................................................................. | 17 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................TGTATGTCTGCACACCAGAAGAGGGC.......................................................................................................................................................................................................................................................................................... | 26 | 7 | 0.14 | 0.14 | - | - | - | - | - | - | - | 0.14 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ATGGGGAACTGAGCCAGCTCTGCCAGGGCTGGGCAAAGACTCTCACCAAGGCAAGCCTGCATGTTCACCCATTCATGTGTTCTCTTTTTCTCTTTAAGATTTATATTACTTATATTGTTTATGTTGTGTTTATGAGTGCTCTATTTGCTTGTATGTCTGCACACCAGAAGAGGGCATCAGATCCCATTACAGATGGTTGTGAGCAACCATATGGTTGCTGGGAATTAAATTCAGACTTCTGGAAGAGCAGCCAGTGCACTTAAACCAACAAGCCATCTCTCCAGCTCCATCCATGCATCCTTTAGAGAAAGTTCTAGGCCTGTGAGAGGCCAGTCTGGTTGTATAGATCAAACTGGAGTTAGACCTGAGACTGAGAGAGCACCTGTGACATCTCCCCTCCTCCCCAGGCTCTGGCCTATGTGGAGGCCTACATTGACTTCGGAGAGGATGATAATTT ......................................................................................................................................................................................................................(((.(((........(((((....)))))...(((.....))).......))).)))..((((((((.(((((((((.(((((.((..(((((....)))))(((((.....))))).....)).))))).))......))))))).))...)))).)).................................................................................... .....................................................................................................................................................................................................................214.............................................................................................................................................................374................................................................................. |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR028730(GSM400967) Tdrd1-associated. (tdrd1 testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .....................................................................................................................................................................AGAGGGCATCAGATCCCATTACAata.......................................................................................................................................................................................................................................................................... | 26 | ata | 4.00 | 0.00 | 2.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................AGGGCATCAGATCCCATTACAgcta.......................................................................................................................................................................................................................................................................... | 25 | gcta | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................TTGTGTTTATGAGTGCTCTATTTGCTTGTA................................................................................................................................................................................................................................................................................................................ | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .........................................................................................................................................................................GGCATCAGATCCCATTACAGAata........................................................................................................................................................................................................................................................................ | 24 | ata | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................GTTCACCCATTCATGgag............................................................................................................................................................................................................................................................................................................................................................................................ | 18 | gag | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................................TCTCCAGCTCCATCCATGCATCCTTTA......................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................CCCATTACAGATGGTTGTGAGCAACCAgat........................................................................................................................................................................................................................................................ | 30 | gat | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ............................................................................................................................................TTGCTTGTATGTCTcaga........................................................................................................................................................................................................................................................................................................... | 18 | caga | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ............................................................GTTCACCCATTCATGga............................................................................................................................................................................................................................................................................................................................................................................................ | 17 | ga | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................................................ATCCATGCATCCTtcc............................................................................................................................................................ | 16 | tcc | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................AGAGGGCATCAGATCCCATTACAaaaa.......................................................................................................................................................................................................................................................................... | 27 | aaaa | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................GGCATCAGATCCCATTACAGATGGaat..................................................................................................................................................................................................................................................................... | 27 | aat | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................AGAGGGCATCAGATCCCATTACAaaga.......................................................................................................................................................................................................................................................................... | 27 | aaga | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................GAGGGCATCAGATCCCATTACAgta.......................................................................................................................................................................................................................................................................... | 25 | gta | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................................CTCCAGCTCCATCCATGC................................................................................................................................................................. | 18 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................................................................................................................................................................................CCAGGCTCTGGCCTA....................................... | 15 | 16 | 0.06 | 0.06 | - | - | - | - | - | - | - | - | 0.06 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |