| Gene: 1500034J01Rik | ID: uc009mdi.1_intron_1_0_chr8_73996017_f | SPECIES: mm9 |
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(8) OTHER.mut |
(6) PIWI.ip |
(2) PIWI.mut |
(29) TESTES |
| ACAAGAGCAACTTCAGCAGGTTCCACGCGGACTCTGTGTGCAAGGCCTCGGTGAGTGTGGGGCTGGGGGTGGCGTCACTGTCCTGAGGATGAGGGTTGCCAGCTAACCCACCGCTCCCCATCCACAGAACCGCCGTCCCTCAGTATACCTGCCGACCCGAGAGTACCCGTCAGAACA ........................................................(((((.....((.(((((...((((((...)))).))...))))).))..))))).................................................................. ..................................................51.............................................................114............................................................. |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | mjTestesWT2() Testes Data. (testes) | mjTestesWT4() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | GSM475281(GSM475281) total RNA. (testes) | GSM179088(GSM179088) Developmentally regulated piRNA clusters implicate MILI in transposon control. (piwi testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR037902(GSM510438) testes_rep3. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................GTGAGTGTGGGGCTGGGGGTGGCGTC..................................................................................................... | 26 | 1 | 7.00 | 7.00 | 6.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................TCCACGCGGACTCTGTGTGCAAGGCC.................................................................................................................................. | 26 | 1 | 6.00 | 6.00 | - | - | - | - | - | - | - | - | - | 1.00 | 1.00 | - | - | - | - | 1.00 | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | 1.00 |
| ...................................................TGAGTGTGGGGCTGGGGGTGGCGT...................................................................................................... | 24 | 1 | 6.00 | 6.00 | - | - | - | 6.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTGAGTGTGGGGCTGGGGGTGGCGT...................................................................................................... | 25 | 1 | 5.00 | 5.00 | - | 3.00 | - | - | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................CCCACCGCTCCCCATCCACAG.................................................. | 21 | 1 | 4.00 | 4.00 | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .....................TCCACGCGGACTCTGTGTGCAAGGCCT................................................................................................................................. | 27 | 1 | 3.00 | 3.00 | - | - | - | - | - | - | - | - | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................CGCGGACTCTGTGTGCAAGG.................................................................................................................................... | 20 | 1 | 3.00 | 3.00 | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTGAGTGTGGGGCTGGaaga........................................................................................................... | 20 | aaga | 3.00 | 0.00 | - | - | - | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................CCCACCGCTCCCCATCCACAGt................................................. | 22 | t | 2.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................TGTCCTGAGGATGAGGGTTGCCAGCTA........................................................................ | 27 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................CGGACTCTGTGTGCAAG..................................................................................................................................... | 17 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................TTCCACGCGGACTCTGTGTGCAAGGCCT................................................................................................................................. | 28 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................CGGACTCTGTGTGCAAGG.................................................................................................................................... | 18 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................TGAGGATGAGGGTTGCCAGCTAACCCA................................................................... | 27 | 1 | 2.00 | 2.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................AGAGTACCCGTCAGAAC. | 17 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...AGAGCAACTTCAGCAagt............................................................................................................................................................ | 18 | agt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ....................TTCCACGCGGACTCTGTGTGCAAGGCCTC................................................................................................................................ | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ........AACTTCAGCAGGTTCCACGCGGACTCTG............................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................TCAGTATACCTGCCGACCCGAGAGT............. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................CCTGCCGACCCGAGAGTACCCGTCAGt... | 27 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTGAGTGTGGGGCTGGGGGTGGCGgc..................................................................................................... | 26 | gc | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTGAGTGTGGGGCTGGGGGTGGC........................................................................................................ | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ....................TTCCACGCGGACTCTGTGTGCAAGGta.................................................................................................................................. | 27 | ta | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .................................................................................................................................................TACCTGCCGACCCGAGAGTACCCGTC...... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........CTTCAGCAGGTTCCAgagc.................................................................................................................................................... | 19 | gagc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .....................TCCACGCGGACTCTGTGTGCAAGGC................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................GTTCCACGCGGACTCTGTGT.......................................................................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTGAGTGTGGGGCTGGGGGTc.......................................................................................................... | 21 | c | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...................................................TGAGTGTGGGGCTGGGGGTGGCGTC..................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................CCACCGCTCCCCATCCACAGtttt.............................................. | 24 | tttt | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTGAGTGTGGGGCTGGGGGTGGCGTCA.................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ..................................................GTGAGTGTGGGGCTGGGGGTGGCG....................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................CCACCGCTCCCCATCCACAG.................................................. | 20 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ACAAGAGCAACTTCAGCAGGTTCCACGCGGACTCTGTGTGCAAGGCCTCGGTGAGTGTGGGGCTGGGGGTGGCGTCACTGTCCTGAGGATGAGGGTTGCCAGCTAACCCACCGCTCCCCATCCACAGAACCGCCGTCCCTCAGTATACCTGCCGACCCGAGAGTACCCGTCAGAACA ........................................................(((((.....((.(((((...((((((...)))).))...))))).))..))))).................................................................. ..................................................51.............................................................114............................................................. |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | mjTestesWT2() Testes Data. (testes) | mjTestesWT4() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | GSM475281(GSM475281) total RNA. (testes) | GSM179088(GSM179088) Developmentally regulated piRNA clusters implicate MILI in transposon control. (piwi testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR037902(GSM510438) testes_rep3. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...................................................................................................................................................CCTGCCGACCCGAGAGTACCCGTCA..... | 25 | 1 | 6.00 | 6.00 | 5.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................GCCGACCCGAGAGTACCCGTCAGAACA | 27 | 1 | 2.00 | 2.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................GCCGTCCCTCAGTATACCTGCCGAa...................... | 25 | a | 2.00 | 0.00 | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................TACCTGCCGACCCGAGAGTACCCGTCA..... | 27 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................CCTCAGTATACCTGCCGACCCGAGA............... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................GCCGACCCGAGAGTACCCGTCAGAA.. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................TGCCGACCCGAGAGTACCCGTCAGA... | 25 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................GCCGTCCCTCAGTATACC............................ | 18 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |