| Gene: Odz3 | ID: uc009lrr.1_intron_18_0_chr8_49427806_r | SPECIES: mm9 |
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(6) OTHER.mut |
(1) OVARY |
(1) PIWI.ip |
(1) PIWI.mut |
(19) TESTES |
| TGGAACTTGCCATTGTTTCCCCGGGTTTCTAGGTCCGGATTGTTCAAGAGGTATGCCAGTTAGATTCCCTTCCTAAACAAGTGGGCCCTAGGAACCCATCAGACTGAGAATGCATAGCAACGCGGCAAAGAAAAGGGGTGGGAAAGGTGCAGAGATTGGGAGGCTCAATGGAGAACGTGGCTGCTGATCCCTCTGTCCTGTGTCATTTCACAGCAGCCTGTCCGGTGCTCTGTAGTGGCAACGGGCAATACTCCAAGGGCCGC |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | mjTestesWT1() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesWT2() Testes Data. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR014234(GSM319958) Ovary total. (ovary) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................................................................TCAGACTGAGAATGCATAGCAACGCGGC......................................................................................................................................... | 28 | 1 | 69.00 | 69.00 | 44.00 | 12.00 | 5.00 | 3.00 | 4.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................TCAGACTGAGAATGCATAGCAACGCGG.......................................................................................................................................... | 27 | 1 | 9.00 | 9.00 | - | - | - | 4.00 | - | 1.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................AGACTGAGAATGCATAGCAACGCGGCA........................................................................................................................................ | 27 | 1 | 6.00 | 6.00 | - | 6.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................TAGGAACCCATCAGACTGAGAATGCAT.................................................................................................................................................... | 27 | 1 | 4.00 | 4.00 | - | - | - | - | 1.00 | - | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | 1.00 | - |
| ............................................................................................................................................................................................................................TCCGGTGCTCTGTAGT........................... | 16 | 1 | 2.00 | 2.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................GTCCGGTGCTCTGTAGTGGCAACG.................... | 24 | 1 | 2.00 | 2.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................TAGGTCCGGATTGTTCAAGAGGTA.................................................................................................................................................................................................................. | 24 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................TAGGAACCCATCAGACTGAGAATGCATA................................................................................................................................................... | 28 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ........................................................................................TAGGAACCCATCAGACTGAGAATGC...................................................................................................................................................... | 25 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................CCGGATTGTTCAAGAG..................................................................................................................................................................................................................... | 16 | 2 | 1.50 | 1.50 | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | 1.00 |
| ..........................TTCTAGGTCCGGATTGTTCAAGAcgt................................................................................................................................................................................................................... | 26 | cgt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ...................................................................................................................................................................................................................................CTCTGTAGTGGCAACGGGCAATA............. | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................TCAGACTGAGAATGCATAGCAACGCGGCA........................................................................................................................................ | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................TAGGAACCCATCAGACTGAGAATGCATAGC................................................................................................................................................. | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ...............................................................................................................................................................................................................................GGTGCTCTGTAGTGGCAACGGGC................. | 23 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................CGGATTGTTCAAGAGGTATGCCA............................................................................................................................................................................................................. | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................CCGGATTGTTCAAGAGcag.................................................................................................................................................................................................................. | 19 | cag | 1.00 | 1.50 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................TAGTGGCAACGGGCAATACT........... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..............................AGGTCCGGATTGTTCAAGA...................................................................................................................................................................................................................... | 19 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................TGTCCTGTGTCATTTCACAGCAGCCTG........................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................TCCGGATTGTTCAAGAGc.................................................................................................................................................................................................................... | 18 | c | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................TGGAGAACGTGGCTGCTGATCCCTCTG.................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................AGAACGTGGCTGCTGATCCCTCTG.................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................TAGGTCCGGATTGTTCAAGAGcagc................................................................................................................................................................................................................. | 25 | cagc | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................CTAAACAAGTGGGCCCTAGGAACCC...................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................TCCGGTGCTCTGTAGTGGC........................ | 19 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| TGGAACTTGCCATTGTTTCCCCGGGTTTCTAGGTCCGGATTGTTCAAGAGGTATGCCAGTTAGATTCCCTTCCTAAACAAGTGGGCCCTAGGAACCCATCAGACTGAGAATGCATAGCAACGCGGCAAAGAAAAGGGGTGGGAAAGGTGCAGAGATTGGGAGGCTCAATGGAGAACGTGGCTGCTGATCCCTCTGTCCTGTGTCATTTCACAGCAGCCTGTCCGGTGCTCTGTAGTGGCAACGGGCAATACTCCAAGGGCCGC |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | mjTestesWT1() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesWT2() Testes Data. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR014234(GSM319958) Ovary total. (ovary) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ....................................................................................................................................................................................................CCTGTGTCATTTCACAGCAGCCT............................................ | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .......................................TTGTTCAAGAGGTATGCCAGTTAGATT..................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................TGATCCCTCTGTCCTGTGTCATTTCA..................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |