| Gene: 1700029J07Rik | ID: uc009lpn.1_intron_6_0_chr8_47059035_r.3p | SPECIES: mm9 |
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(3) OTHER.mut |
(3) PIWI.ip |
(1) PIWI.mut |
(1) TDRD1.ip |
(17) TESTES |
| TGGAAACAAAAACTTTAACCTGCAAAGTATATTGTTCCTAGTTTGGTCTCACAAAAGCTATGCACAAGCCTATCTGATGGGGCTTGTGCGGGTACGTAAAAGAAGTCAACCAACCAACCAATCCAGAGACTTAAAATAATGGCAAATAAATAGTTTGATATTTAATAATCATTCTTTTCTTTAAAATTAATTTCCTGTAGTTTTCAGTGTAAAGTAGGATTTTGCTGCAAAAGAAGATCTAAGAACCTTT |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesWT4() Testes Data. (testes) | mjTestesWT1() Testes Data. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesWT2() Testes Data. (testes) | GSM509276(GSM509276) small RNA cloning by length. (testes) | SRR028730(GSM400967) Tdrd1-associated. (tdrd1 testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR029040(GSM433292) 6w_hetero_tdrd6-KO. (tdrd6 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...............................................................................................................AACCAACCAATCCAGAGACTTAAAATAATGGCAAATAAATAGTTTGATATTT....................................................................................... | 52 | 1 | 35.00 | 35.00 | 35.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................TCTGATGGGGCTTGTGCGGGTACGTA........................................................................................................................................................ | 26 | 1 | 7.00 | 7.00 | - | 7.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..GAAACAAAAACTTTAACCTGCA.................................................................................................................................................................................................................................. | 22 | 1 | 4.00 | 4.00 | - | - | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................ATCCAGAGACTTAAAATAAT.............................................................................................................. | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ...............................................................................................................................................................................................................TGTAAAGTAGGATTTTGCTGCAAAAGAAGAT............ | 31 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................AAGTAGGATTTTGCTGCAAAAGAAGATC........... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .....................................................................................GTGCGGGTACGTAAAAGAAGTC............................................................................................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................GTGTAAAGTAGGATTTTGCTGCAAAAGA................ | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................GTAAAGTAGGATTTTGCTGCAAAAGAAG.............. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................AGTGTAAAGTAGGATTTTGCTGCAAAAG................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ...............................................................................................................................................................................................................TGTAAAGTAGGATTTTGC......................... | 18 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................GTAAAGTAGGATTTTGCTGCAAAAGAA............... | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................AAGTAGGATTTTGCTGCAAAAGAAGAT............ | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................AGTAGGATTTTGCTGCAAAAGAAGAT............ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ........................................................................TCTGATGGGGCTTGTGCGGGTACG.......................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .....................................................................................................................................AAATAATGGCAAATgaga................................................................................................... | 18 | gaga | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................AAGTAGGATTTTGCTGCAAAAGAAGATt........... | 28 | t | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| TGGAAACAAAAACTTTAACCTGCAAAGTATATTGTTCCTAGTTTGGTCTCACAAAAGCTATGCACAAGCCTATCTGATGGGGCTTGTGCGGGTACGTAAAAGAAGTCAACCAACCAACCAATCCAGAGACTTAAAATAATGGCAAATAAATAGTTTGATATTTAATAATCATTCTTTTCTTTAAAATTAATTTCCTGTAGTTTTCAGTGTAAAGTAGGATTTTGCTGCAAAAGAAGATCTAAGAACCTTT |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesWT4() Testes Data. (testes) | mjTestesWT1() Testes Data. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesWT2() Testes Data. (testes) | GSM509276(GSM509276) small RNA cloning by length. (testes) | SRR028730(GSM400967) Tdrd1-associated. (tdrd1 testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR029040(GSM433292) 6w_hetero_tdrd6-KO. (tdrd6 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .................TGCAAAGTATATTGTTCCTttt................................................................................................................................................................................................................... | 22 | ttt | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..........TTTAACCTGCAAAGTATATTGTTCCatt.................................................................................................................................................................................................................... | 28 | att | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..................CTGCAAAGTATATTGTTCCTt................................................................................................................................................................................................................... | 21 | t | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...............TAACCTGCAAAGTATATTGTT...................................................................................................................................................................................................................... | 21 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.33 | - |
| ..................CCTGCAAAGTATATTGTTCCT................................................................................................................................................................................................................... | 21 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.33 |
| ..............TTAACCTGCAAAGTATATTGTTCC.................................................................................................................................................................................................................... | 24 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.33 | - |
| ......................CAAAGTATATTGTTCCT................................................................................................................................................................................................................... | 17 | 4 | 0.25 | 0.25 | - | - | - | - | - | - | - | 0.25 | - | - | - | - | - | - | - | - | - |