| Gene: Rbpms | ID: uc009lkk.1_intron_2_0_chr8_34905623_r.5p | SPECIES: mm9 |
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(4) OTHER.mut |
(3) PIWI.ip |
(1) PIWI.mut |
(13) TESTES |
| CTCTTCCTCCTCCTGCCGCTTTCACCTACCCCGCTTCACTGCATGCCCAGGTAATTTATGCCCATCGGCCACCTCTCCACTCACCCCACCACCAGCCCTTTCAGACCCGGTCCCCCAGAGCACACCATGTGACTAACACCTACCCAGCTAACAGATCCACCTCCAGGAAGTGAATGGTTTCCCTCTCCGACCAGCTGACCCCCTTCCGGGACCTCCGAGGACCATCTGACAGCCATGACCCCACCCACTG |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | mjTestesWT3() Testes Data. (testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .............................................................................................................................................ACCCAGCTAACAGATCCACCTCCAGGAAGTGAATGGTTTCCCTCTCCGACCA......................................................... | 52 | 1 | 34.00 | 34.00 | 34.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................GGGACCTCCGAGGACtgt......................... | 18 | tgt | 3.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | 1.00 | - | 1.00 | - |
| .......................................................................................................................................................................................TCTCCGACCAGCTGACCCCCTTCCGa......................................... | 26 | a | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .....................................................................................................................GAGCACACCATGTGACTAACACCTACCC......................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .......................................................................................................................................................................................TCTCCGACCAGCTGACCCCCTTCCGGGAC...................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..........................TACCCCGCTTCACTGCATGCCCAGatg..................................................................................................................................................................................................... | 27 | atg | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..........................TACCCCGCTTCACTGCATGCCCAGatgc.................................................................................................................................................................................................... | 28 | atgc | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................TAACACCTACCCAGCTAACAGATCCACCTC....................................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................TCCGAGGACCATCTGACAGCCATGACCCC........ | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ..............................................................................................GCCCTTTCAGACCCGGTCCCCCAGAGC................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ............................................................................................................................................................................................................TCCGGGACCTCCGAGGACCATCTGACA................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| CTCTTCCTCCTCCTGCCGCTTTCACCTACCCCGCTTCACTGCATGCCCAGGTAATTTATGCCCATCGGCCACCTCTCCACTCACCCCACCACCAGCCCTTTCAGACCCGGTCCCCCAGAGCACACCATGTGACTAACACCTACCCAGCTAACAGATCCACCTCCAGGAAGTGAATGGTTTCCCTCTCCGACCAGCTGACCCCCTTCCGGGACCTCCGAGGACCATCTGACAGCCATGACCCCACCCACTG |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | mjTestesWT3() Testes Data. (testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ............................................................TCGGCCACCTCTCCgagg............................................................................................................................................................................ | 18 | gagg | 2.00 | 0.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................AGCTGACCCCCTTCcagt............................................ | 18 | cagt | 2.00 | 0.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - |
| ............................................................TCGGCCACCTCTCCgtgc............................................................................................................................................................................ | 18 | gtgc | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ............................................................TCGGCCACCTCTCCgcgg............................................................................................................................................................................ | 18 | gcgg | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |