| Gene: Tacc1 | ID: uc009lfs.1_intron_9_0_chr8_26288467_r.5p | SPECIES: mm9 |
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(1) OTHER.mut |
(4) PIWI.ip |
(1) PIWI.mut |
(19) TESTES |
| GTTAATGAAATCTTAGACTCACCCAAGAAGGCAAAGTCACGTTTAATAACGTACGTGAGTGACATCGGGCGCTGGGTGTGTGCTCTGGATTGTCCTCTGGGAGTTTGGCAGCTACTTTTGGTCTCTGTGAATTGCAACCATAAATGTTTGAGATACAGTGGGGCATTTTACACGGTAGCCTTCCCTCCTCTGCTCAATTCTTCTGTCCATTTGGAAGCATCACAGATCAGTTGATTTCTGCCTTATTTCT .................................................................................(((((..((..(((....)))))..)).))).............((((((.(((..((((...(((.......))))))).))).)))))).............................................................................. ................................................................................81...........................................................................................174.......................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR363960(GSM822762) Adult Library#1Small RNA Miwi IPDuplexed run:. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | mjTestesWT4() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | mjTestesWT1() Testes Data. (testes) | SRR363959(GSM822761) AdultSmall RNA Miwi IPread_length: 36. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .....TGAAATCTTAGACTCACCCAAGAAGGCA......................................................................................................................................................................................................................... | 28 | 1 | 6.00 | 6.00 | 1.00 | 3.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................TGGATTGTCCTCTGGGAGTTTGGCAGC.......................................................................................................................................... | 27 | 1 | 5.00 | 5.00 | - | - | 1.00 | - | 1.00 | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .....TGAAATCTTAGACTCACCCAAGAAGGC.......................................................................................................................................................................................................................... | 27 | 1 | 5.00 | 5.00 | 3.00 | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................TAATAACGTACGTGAGTGACATCGGGC.................................................................................................................................................................................... | 27 | 1 | 4.00 | 4.00 | - | - | - | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ...................................................................................TCTGGATTGTCCTCTGGGAGTTTGGC............................................................................................................................................. | 26 | 1 | 3.00 | 3.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ............................................................................................................................................TAAATGTTTGAGATACAGTGGGGCATTTTA................................................................................ | 30 | 1 | 3.00 | 3.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .....................................................................................TGGATTGTCCTCTGGGAGTTTGGC............................................................................................................................................. | 24 | 1 | 3.00 | 3.00 | - | - | - | - | - | - | - | - | - | 2.00 | 1.00 | - | - | - | - | - | - | - | - |
| ..........TCTTAGACTCACCCAAGAAGGCAA........................................................................................................................................................................................................................ | 24 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................ACAGATCAGTTGATTTCT........... | 18 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................TAAATGTTTGAGATACAGTGGGGCA..................................................................................... | 25 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - |
| ....................................................................................................................................................TGAGATACAGTGGGGCATTTTACACGGTA......................................................................... | 29 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................TGGTCTCTGTGAATTGCAACCATAAA.......................................................................................................... | 26 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................TAAATGTTTGAGATACAGTGGGGCATT................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................GATTGTCCTCTGGGAGTTTGGCAGC.......................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................TAAATGTTTGAGATACAGTGGGGCATTTTAt............................................................................... | 31 | t | 1.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .......................................................................................GATTGTCCTCTGGGAGTTTGGCAGCTAC....................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................GCAGCTACTTTTGGTCTCTGTGAATTGCAAC................................................................................................................ | 31 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......GAAATCTTAGACTCACCCAAGAAGGCAA........................................................................................................................................................................................................................ | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .....TGAAATCTTAGACTCACCCAAGAAGGa.......................................................................................................................................................................................................................... | 27 | a | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................TGAGATACAGTGGGGCATTTTACACGGT.......................................................................... | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................TGTTTGAGATACAGTGGGGCATTTTA................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .....TGAAATCTTAGACTCACCCAAGAAGcc.......................................................................................................................................................................................................................... | 27 | cc | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| GTTAATGAAATCTTAGACTCACCCAAGAAGGCAAAGTCACGTTTAATAACGTACGTGAGTGACATCGGGCGCTGGGTGTGTGCTCTGGATTGTCCTCTGGGAGTTTGGCAGCTACTTTTGGTCTCTGTGAATTGCAACCATAAATGTTTGAGATACAGTGGGGCATTTTACACGGTAGCCTTCCCTCCTCTGCTCAATTCTTCTGTCCATTTGGAAGCATCACAGATCAGTTGATTTCTGCCTTATTTCT .................................................................................(((((..((..(((....)))))..)).))).............((((((.(((..((((...(((.......))))))).))).)))))).............................................................................. ................................................................................81...........................................................................................174.......................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR363960(GSM822762) Adult Library#1Small RNA Miwi IPDuplexed run:. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | mjTestesWT4() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | mjTestesWT1() Testes Data. (testes) | SRR363959(GSM822761) AdultSmall RNA Miwi IPread_length: 36. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................................................................................................................................................CCCTCCTCTGCTCAAgtct..................................................... | 19 | gtct | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |