| Gene: Alg11 | ID: uc009lcl.1_intron_1_0_chr8_23172589_f.3p | SPECIES: mm9 |
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(6) OTHER.mut |
(6) PIWI.ip |
(1) PIWI.mut |
(19) TESTES |
| AGTCTGCTTATGATTATAAGGAAATTATAACATTTGGCTTAATTTTAACCTAAATTAATGACATGTCATTTCAGGTATCCTGAAGCAGTTTATGTTGTATATACTGGTGACATTAATGTCAGTGGTCAACAGATACTAGATGGTGCTTTCAGAAGGTTTAACATCAAGTTGGCTCACCCAGTGCAGTTTGTTTTCTTAAGGAAACGCTACCTTGTGGAAGATTCCCGGTATCCTCACTTCACATTGCTAG ............................................................................................................((((....)))).(((((((......(((.((((..((((.....))))....)))).))))))).)))......................................................................... ............................................................................................................109...................................................................179..................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR014235(GSM319959) 2 dpp total. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | GSM475281(GSM475281) total RNA. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR029040(GSM433292) 6w_hetero_tdrd6-KO. (tdrd6 testes) | GSM179088(GSM179088) Developmentally regulated piRNA clusters implicate MILI in transposon control. (piwi testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ....................................................................................................................................................................................................TAAGGAAACGCTACCTTGTGGAAGATT........................... | 27 | 1 | 3.00 | 3.00 | - | - | 2.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................TTCAGAAGGTTTAACATCAAGTTGGCTC........................................................................... | 28 | 1 | 3.00 | 3.00 | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................CCTCACTTCACATTGCTAG | 19 | 1 | 2.00 | 2.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................TAAGGAAACGCTACCTTGTGGAAGATTC.......................... | 28 | 1 | 2.00 | 2.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................TAATGTCAGTGGTCAACAGATACTAG............................................................................................................... | 26 | 1 | 2.00 | 2.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................TGGAAGATTCCCGGTATCCTCACTTC.......... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................TGCAGTTTGTTTTCTTAAGGAAACGCTACCT...................................... | 31 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .....................................................................................................................................TACTAGATGGTGCTTTCAGAAGGTTTA.......................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................GAAGCAGTTTATGTTGTATATACTGGT.............................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ............................................................................................................................................TGGTGCTTTCAGAAGGTTTAACATCAA................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .................................................................................................................................................................................................TCTTAAGGAAACGCTACCTTGTGG................................. | 24 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................TCAACAGATACTAGATGGT.......................................................................................................... | 19 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................ATTAATGACATGTCATTTCAGGT.............................................................................................................................................................................. | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .................................................................................................................TAATGTCAGTGGTCAACAGATACTAGA.............................................................................................................. | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................TAGATGGTGCTTTCAGAAGGTTTAACATCtc................................................................................... | 31 | tc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................ATGGTGCTTTCAGAAGGTTTAACATC..................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .....................................................................................................................................TACTAGATGGTGCTTTCAGAAGGgtta.......................................................................................... | 27 | gtta | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................TATACTGGTGACATTAATGTCAGTGGTC........................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................TCAAGTTGGCTCACCCAGTGCAGTTTG............................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .............................................................................TCCTGAAGCAGTTTATGTTGTATATACT................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................TGGTGCTTTCAGAAGGTTTAACATCA.................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................TTTCAGAAGGTTTAACATCAAGTTGGC............................................................................. | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................TGTCAGTGGTCAACAGATACTAGATGGT.......................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................AAGGAAACGCTACCTTGTGGAAGATTC.......................... | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................TCTTAAGGAAACGCTACCTTGTGGAAG.............................. | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................TAAGGAAACGCTACCTTGTGGAAGA............................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................TACTAGATGGTGCTTTCAGAAGGatt........................................................................................... | 26 | att | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................TGGTGCTTTCAGAAGGTTTAACATCAAG.................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................TCTTAAGGAAACGCTACCTTGTGGAAGA............................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................TGCTTTCAGAAGGTTTAACATCAAG.................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ...............................................................................................TGTATATACTGGTGACATTAATGTC.................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................CCTGAAGCAGTTTATGTTGTATATACTGt............................................................................................................................................... | 29 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ............................................................................................TGTTGTATATACTGGTGACATTAATGT................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| AGTCTGCTTATGATTATAAGGAAATTATAACATTTGGCTTAATTTTAACCTAAATTAATGACATGTCATTTCAGGTATCCTGAAGCAGTTTATGTTGTATATACTGGTGACATTAATGTCAGTGGTCAACAGATACTAGATGGTGCTTTCAGAAGGTTTAACATCAAGTTGGCTCACCCAGTGCAGTTTGTTTTCTTAAGGAAACGCTACCTTGTGGAAGATTCCCGGTATCCTCACTTCACATTGCTAG ............................................................................................................((((....)))).(((((((......(((.((((..((((.....))))....)))).))))))).)))......................................................................... ............................................................................................................109...................................................................179..................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR014235(GSM319959) 2 dpp total. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | GSM475281(GSM475281) total RNA. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR029040(GSM433292) 6w_hetero_tdrd6-KO. (tdrd6 testes) | GSM179088(GSM179088) Developmentally regulated piRNA clusters implicate MILI in transposon control. (piwi testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..............................................................................................................................................................................................CTTAAGGAAACGCcttg........................................... | 17 | cttg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |