| Gene: H19 | ID: uc009kob.1_intron_1_0_chr7_149762236_r | SPECIES: mm9 |
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(5) OTHER.mut |
(13) TESTES |
| TGCTGCTCTCTGGATCCTCCTCCCCCTACCTTGAACCCTCAAGATGAAAGGTGAGTTCTCTTCTGCCCCATGTGGGTGGGAGAGGGTGGGATGCCAAGGACAGGGGTCTCATTCTCTCCCACCCATAGAAATGGTGCTACCCAGCTCATGTCTGGGCCTTTGAATCCGGGGACTTCTT ...................................................................(((((((((((((((((((((((((.((.......)).)))))))))))))))))))))....))))............................................ ...................................................................68.................................................................135......................................... |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | mjTestesWT2() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | mjTestesWT4() Testes Data. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | SRR037902(GSM510438) testes_rep3. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ........................................................................TGGGTGGGAGAGGGTGGGATGC.................................................................................... | 22 | 1 | 6.00 | 6.00 | - | - | 4.00 | - | - | 2.00 | - | - | - | - | - | - | - |
| ....................................................................................................................................................TGTCTGGGCCTTTGAATCCGGGGAC..... | 25 | 1 | 6.00 | 6.00 | 5.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................AGCTCATGTCTGGGCCTTTGAATCCGGGG....... | 29 | 1 | 6.00 | 6.00 | 6.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .GCTGCTCTCTGGATCCTCCT............................................................................................................................................................. | 20 | 1 | 5.00 | 5.00 | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................TGTCTGGGCCTTTGAATCCGGGG....... | 23 | 1 | 4.00 | 4.00 | 3.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................ATGGTGCTACCCAGCTCATGTCTGGGCCTTTGAATC............ | 36 | 1 | 4.00 | 4.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................ATGTCTGGGCCTTTGAATCCGGG........ | 23 | 1 | 4.00 | 4.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..CTGCTCTCTGGATCCTCCTCCCC......................................................................................................................................................... | 23 | 1 | 3.00 | 3.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................GCTCATGTCTGGGCCTTTGAATCCGG......... | 26 | 1 | 3.00 | 3.00 | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................GGGCCTTTGAATCCGGGG....... | 18 | 1 | 3.00 | 3.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................GCCTTTGAATCCGGGGACT.... | 19 | 1 | 3.00 | 3.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................TACCCAGCTCATGTCTGGGCCTTTGAATCCGGGGA...... | 35 | 1 | 2.00 | 2.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................AGCTCATGTCTGGGCCTTTGAATCCG.......... | 26 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................ATGTCTGGGCCTTTGAATCCGG......... | 22 | 1 | 2.00 | 2.00 | - | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ..........................................................................................................TCTCATTCTCTCCCACCCATAG.................................................. | 22 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................GTGGGAGAGGGTGGGATGtta.................................................................................. | 21 | tta | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .GCTGCTCTCTGGATCCTCCTCCCCC........................................................................................................................................................ | 25 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ......................................................................TGTGGGTGGGAGAGGGTGaaa....................................................................................... | 21 | aaa | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................ATGTCTGGGCCTTTGAATCC........... | 20 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ............................CCTTGAACCCTCAAGATGAAAGa............................................................................................................................... | 23 | a | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .................................................................................................................................................TCATGTCTGGGCCTTTGAATCC........... | 22 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................GTCTGGGCCTTTGAATCCGG......... | 20 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................TCATGTCTGGGCCTTTGAATCCGGGG....... | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................CATGTCTGGGCCTTTGAA.............. | 18 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................TCATTCTCTCCCACCCATAGAgt............................................... | 23 | gt | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ........................................................................................................................................................TGGGCCTTTGAATCCGGG........ | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ..............................TTGAACCCTCAAGAgtgc.................................................................................................................................. | 18 | gtgc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ....GCTCTCTGGATCCTCCTCCCCCTACCTTG................................................................................................................................................. | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ...................................................................................................................................................ATGTCTGGGCCTTTGAATCCGGGG....... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ........................................................................................................................................................TGGGCCTTTGAATCCGGGGACT.... | 22 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................GTCTGGGCCTTTGAATC............ | 17 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................CTTTGAATCCGGGGACTTCT. | 20 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................CTGGGCCTTTGAATCCGGGGA...... | 21 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ......................................TCAAGATGAAAGGTGtgcc......................................................................................................................... | 19 | tgcc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ...TGCTCTCTGGATCCTC............................................................................................................................................................... | 16 | 7 | 0.86 | 0.86 | - | - | - | - | - | - | - | 0.86 | - | - | - | - | - |
| .......................................................................................................................................................CTGGGCCTTTGAATCC........... | 16 | 3 | 0.33 | 0.33 | - | 0.33 | - | - | - | - | - | - | - | - | - | - | - |
| TGCTGCTCTCTGGATCCTCCTCCCCCTACCTTGAACCCTCAAGATGAAAGGTGAGTTCTCTTCTGCCCCATGTGGGTGGGAGAGGGTGGGATGCCAAGGACAGGGGTCTCATTCTCTCCCACCCATAGAAATGGTGCTACCCAGCTCATGTCTGGGCCTTTGAATCCGGGGACTTCTT ...................................................................(((((((((((((((((((((((((.((.......)).)))))))))))))))))))))....))))............................................ ...................................................................68.................................................................135......................................... |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | mjTestesWT2() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | mjTestesWT4() Testes Data. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | SRR037902(GSM510438) testes_rep3. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..........................................................................GGAGAGGGTGGGATgcca...................................................................................... | 18 | gcca | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |